0000000000006484

AUTHOR

Ari T. Marttila

showing 9 related works from this author

Recombinant NeutraLite Avidin: a non-glycosylated, acidic mutant of chicken avidin that exhibits high affinity for biotin and low non-specific bindin…

2000

AbstractA recombinant non-glycosylated and acidic form of avidin was designed and expressed in soluble form in baculovirus-infected insect cells. The mutations were based on the same principles that guided the design of the chemically and enzymatically modified avidin derivative, known as NeutraLite Avidin. In this novel recombinant avidin derivative, five out of the eight arginine residues were replaced with neutral amino acids, and two of the lysine residues were replaced by glutamic acid. In addition, the carbohydrate-bearing asparagine-17 residue was altered to an isoleucine, according to the known sequences of avidin-related genes. The resultant mutant protein, termed recombinant Neutr…

StreptavidinGlycosylationMolecular Sequence DataBiophysicsBiotinChick EmbryoNon-specific bindingBiochemistrylaw.inventionchemistry.chemical_compoundBiotinstomatognathic systemStructural BiologylawMutant proteinNon-glycosylated mutantGeneticsAnimalsHumansAmino Acid SequenceIsoelectric PointProtein Structure QuaternaryMolecular BiologyCells CulturedbiologyAvidin-biotin technologyDNACell BiologyProtein engineeringrespiratory systemAvidinRecombinant ProteinsKineticsAmino Acid SubstitutionchemistryBiochemistryBiotinylationMutationbiology.proteinRecombinant DNAThermodynamicsProtein engineeringEndopeptidase KIsoleucineBaculoviridaeProtein BindingAvidinFEBS Letters
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Enhanced Gene Delivery by Avidin-Displaying Baculovirus

2004

Flexible alteration of virus surface properties would be beneficial for enhanced and targeted gene delivery. A useful approach could be based on a high-affinity receptor–ligand pair, such as avidin and biotin. In this study, we have constructed an avidin-displaying baculovirus, Baavi. Avidin display was expected to enhance cell transduction due to the high positive charge of avidin in physiological pH and to provide a binding site for covering the virus with desired biotinylated ligands. Successful incorporation of avidin on the virus envelope was detected by immunoblotting and electron microscopy. Multiple biotin-binding sites per virus were detected with fluorescence-correlation spectrosc…

Biotin bindingGenetic VectorsBiotinBiosensing TechniquesBiologyGene deliveryCell Linechemistry.chemical_compoundTransduction (genetics)BiotinViral envelopeTransduction GeneticCell Line TumorDrug DiscoveryGeneticsAnimalsBiotinylationBinding siteMolecular BiologyPharmacologyEpidermal Growth FactorGene Transfer TechniquesAvidinMolecular biologyCell biologyRatsErbB ReceptorsSpectrometry FluorescencechemistryBiotinylationbiology.proteinMolecular MedicineRabbitsBaculoviridaeViral Fusion ProteinsAvidinProtein BindingMolecular Therapy
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Targeting of biotinylated compounds to its target tissue using a low-density lipoprotein receptor–avidin fusion protein

2003

The very high binding affinity of avidin to biotin is one of the highest to occur in nature. We constructed a fusion protein composed of avidin and the endocytotic LDL receptor in order to target biotinylated molecules to cells of the desired tissues. In addition to the native avidin, charge-mutated and nonglycosylated avidins were utilized as part of the fusion proteins, in order to modify its properties. All of the fusion protein versions retained the biotin-binding capacity. Although the specificity was not increased, however, fusion proteins composed of natural avidin and nonglycosylated avidin bound most efficiently to the biotinylated ligands. Fluorescence microscopy and atomic force …

Recombinant Fusion ProteinsBlotting WesternGenetic VectorsBiotinBiologyCell FractionationMicroscopy Atomic ForceCell membranechemistry.chemical_compoundBiotinGeneticsFluorescence microscopemedicineAnimalsMolecular BiologyBrain NeoplasmsCell MembraneGenetic TherapyGliomaAvidinLigand (biochemistry)Semliki forest virusFusion proteinRatsmedicine.anatomical_structureMicroscopy FluorescenceReceptors LDLchemistryBiochemistryBiotinylationGene TargetingLDL receptorbiology.proteinMolecular MedicineAvidinGene Therapy
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Biotin Induces Tetramerization of a Recombinant Monomeric Avidin

2001

Chicken avidin, a homotetramer that binds four molecules of biotin was converted to a monomeric form by successive mutations of interface residues to alanine. The major contribution to monomer formation was the mutation of two aspartic acid residues, which together account for ten hydrogen bonding interactions at the 1-4 interface. Mutation of these residues, together with the three hydrophobic residues at the 1-3 interface, led to stable monomer formation in the absence of biotin. Upon addition of biotin, the monomeric avidin reassociated to the tetramer, which exhibited properties similar to those of native avidin, with respect to biotin binding, thermostability, and protease resistance. …

Biotin bindingbiologyProtein subunitCell BiologyBiochemistrychemistry.chemical_compoundMonomerchemistryBiotinTetramerBiochemistryBiotinylationbiology.proteinBiophysicsMolecular BiologyAvidinHomotetramerJournal of Biological Chemistry
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Mutation of the important Tyr-33 residue of chicken avidin: functional and structural consequences

2002

The strong interaction between avidin and biotin is so tight (dissociation constant 10-15M) that conditions usually sufficient for protein denaturing fail to dislodge biotin from the avidin—biotin complex. This kind of irreversible binding hinders the use of avidin in applications such as affinity purification or protein immobilization. To address this concern, we have constructed a series of mutants of the strategically positioned Tyr-33 in order to study the role of this residue in biotin binding, and to create avidin variants with more reversible ligand-binding properties. Unexpectedly, an avidin mutant in which Tyr-33 was replaced with phenylalanine (Avm-Y33F) displayed similar biotin-b…

Biotin bindingBiotinPlasma protein bindingLigandsBiochemistrychemistry.chemical_compoundBiotinAnimalsBinding siteMolecular BiologyBinding SitesMolecular StructurebiologyChemistryTemperatureHydrogen BondingCell BiologyHydrogen-Ion ConcentrationAvidinOxygenDissociation constantBiochemistryBiotinylationMutationMutagenesis Site-Directedbiology.proteinTyrosineProtein quaternary structureEndopeptidase KChickensProtein BindingResearch ArticleAvidinBiochemical Journal
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Characterization of poultry egg-white avidins and their potential as a tool in pretargeting cancer treatment.

2003

Chicken avidin and bacterial streptavidin are proteins used in a wide variety of applications in the life sciences due to their strong affinity for biotin. A new and promising use for them is in medical pretargeting cancer treatments. However, their pharmacokinetics and immunological properties are not always optimal, thereby limiting their use in these applications. To search for potentially beneficial new candidates, we screened egg white from four different poultry species for avidin. Avidin proteins, isolated from the duck, goose, ostrich and turkey, showed a similar tetrameric structure, similar glycosylation and stability against both temperature and proteolytic activity of proteinase…

StreptavidinGlycosylationanimal structuresBiotinBiochemistryAntibodiesBirds03 medical and health scienceschemistry.chemical_compound0302 clinical medicineGooseBiotinstomatognathic systemSequence Analysis Proteinbiology.animalNeoplasmsAnimalsMolecular BiologyPhylogeny030304 developmental biologyPretargeting0303 health sciencesbiologyCell Biologyrespiratory systemProteinase KAvidinMolecular biology3. Good healthchemistryBiochemistry030220 oncology & carcinogenesisbiology.proteinAvidinEgg whiteResearch ArticleProtein Binding
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Engineering of chicken avidin: a progressive series of reduced charge mutants.

1998

Avidin, a positively charged egg-white glycoprotein, is a widely used tool in biotechnological applications because of its ability to bind biotin strongly. The high pI of avidin (approximately 10.5), however, is a hindrance in certain applications due to non-specific (charge-related) binding. Here we report a construction of a series of avidin charge mutants with pIs ranging from 9.4 to 4.7. Rational design of the avidin mutants was based on known crystallographic data together with comparative sequence alignment of avidin, streptavidin and a set of avidin-related genes which occur in the chicken genome. All charge mutants retained the ability to bind biotin tightly according to optical bio…

StreptavidinDNA ComplementaryHot TemperatureMutantBiophysicsBiotinSequence alignmentBiologySpodopteraProtein EngineeringBiochemistrychemistry.chemical_compoundstomatognathic systemBiotinStructural BiologyGeneticsAnimalsMolecular BiologyCharge mutantAvidin-biotin technologyRational designCell BiologyProtein engineeringrespiratory systemAvidinDNA-Binding ProteinschemistryBiochemistryBiotinylationbiology.proteinMutagenesis Site-DirectedChickensAvidinFEBS letters
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Mutation of a critical tryptophan to lysine in avidin or streptavidin may explain why sea urchin fibropellin adopts an avidin-like domain

1999

Sea urchin fibropellins are epidermal growth factor homologues that harbor a C-terminal domain, similar in sequence to hen egg-white avidin and bacterial streptavidin. The fibropellin sequence was used as a conceptual template for mutation of designated conserved tryptophan residues in the biotin-binding sites of the tetrameric proteins, avidin and streptavidin. Three different mutations of avidin, Trp-110-Lys, Trp-70-Arg and the double mutant, were expressed in a baculovirus-infected insect cell system. A mutant of streptavidin, Trp-120-Lys, was similarly expressed. The homologous tryptophan to lysine (W--K) mutations of avidin and streptavidin were both capable of binding biotin and bioti…

StreptavidinBiotin bindingTime FactorsFunctional dimerLysineMutantBiophysicsBiotinEnzyme-Linked Immunosorbent AssayBiologyBiochemistrychemistry.chemical_compoundBiotinTetramerStructural BiologyGeneticsAnimalsMolecular BiologyExtracellular Matrix ProteinsBinding SitesEpidermal Growth FactorLysineAvidin-biotin technologyTemperatureTryptophanCell BiologyAvidinRecombinant ProteinsKineticsReversiblechemistryBiochemistryBiotinylationSea UrchinsMutationbiology.proteinRecombinant avidin and streptavidinStreptavidinBiotin-bindingAvidinChromatography LiquidProtein BindingFEBS Letters
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Dual-affinity avidin molecules

2005

A recently reported dual-chain avidin was modified further to contain two distinct, independent types of ligand-binding sites within a single polypeptide chain. Chicken avidin is normally a tetrameric glycoprotein that binds water-soluble d-biotin with extreme affinity (Kd ≈ 10−15M). Avidin is utilized in various applications and techniques in the life sciences and in the nanosciences. In a recent study, we described a novel avidin monomer-fusion chimera that joins two circularly permuted monomers into a single polypeptide chain. Two of these dual-chain avidins were observed to associate spontaneously to form a dimer equivalent to the wt tetramer. In the present study, we successfully used …

DimerBiochemistryChromatography AffinityProtein Structure Secondarychemistry.chemical_compoundBiotinAffinity chromatographyTetramerStructural BiologyAnimalsBinding siteMolecular BiologyFluorescent Dyeschemistry.chemical_classificationBinding SitesbiologyChemistryTemperatureAvidinBiochemistryBiotinylationbiology.proteinThermodynamicsGlycoproteinChickensProtein BindingAvidinProteins: Structure, Function, and Bioinformatics
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