0000000000055643

AUTHOR

Simone Di Micco

0000-0002-4688-1080

showing 5 related works from this author

Identification of 2-(thiophen-2-yl)acetic Acid-Based Lead Compound for mPGES-1 Inhibition.

2021

We report the implementation of our in silico/synthesis pipeline by targeting the glutathione-dependent enzyme mPGES-1, a valuable macromolecular target in both cancer therapy and inflammation therapy. Specifically, by using a virtual fragment screening approach of aromatic bromides, straightforwardly modifiable by the Suzuki-Miyaura reaction, we identified 3-phenylpropanoic acid and 2-(thiophen-2-yl)acetic acid to be suitable chemical platforms to develop tighter mPGES-1 inhibitors. Among these, compounds 1c and 2c showed selective inhibitory activity against mPGES-1 in the low micromolar range in accordance with molecular modeling calculations. Moreover, 1c and 2c exhibited interesting IC…

Molecular modelIn silicoanti-inflammatory drugsanti-inflammatory drugs; anticancer agents; fragment-based approach; mPGES-1 inhibitors; Suzuki-Miyaura cross-coupling01 natural sciences03 medical and health sciencesAcetic acidchemistry.chemical_compoundanticancer agentsQD1-999Suzuki-Miyaura cross-coupling030304 developmental biologyOriginal ResearchA549 cellchemistry.chemical_classification0303 health sciences010405 organic chemistryfragment-based approachmPGES-1 inhibitorsGeneral ChemistryCombinatorial chemistry0104 chemical sciencesChemistryEnzymechemistryApoptosisLead compoundMacromoleculeFrontiers in chemistry
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Overcome Chemoresistance: Biophysical and Structural Analysis of Synthetic FHIT-Derived Peptides.

2021

The fragile histidine triad (FHIT) protein is a member of the large and ubiquitous histidine triad (HIT) family of proteins. On the basis of genetic evidence, it has been postulated that the FHIT protein may function as tumor suppressor, implying a role for the FHIT protein in carcinogenesis. Recently, Gaudio et al. reported that FHIT binds and delocalizes annexin A4 (ANXA4) from plasma membrane to cytosol in paclitaxel-resistant lung cancer cells, thus restoring their chemosensitivity to the drug. They also identified the smallest protein sequence of the FHIT still interacting with ANXA4, ranging from position 7 to 13: QHLIKPS. This short sequence of FHIT protein was not only able to bind …

ChemistryFHITQH301-705.5annexin A4; biophysical assay; chemoresistance; FHIT; peptidechemoresistanceComputational biologyBiochemistry Genetics and Molecular Biology (miscellaneous)Biochemistrypeptideannexin A4FHITchemoresistance peptide FHIT annexin A4 biophysical assayMolecular Biosciencesbiophysical assayBiology (General)Molecular BiologyneoplasmsOriginal ResearchFrontiers in molecular biosciences
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2,3-Dihydrobenzofuran privileged structures as new bioinspired lead compounds for the design of mPGES-1 inhibitors

2016

International audience; 2,3-Dihydrobenzofurans are proposed as privileged structures and used as chemical platform to design small compound libraries. By combining molecular docking calculations and experimental verification of biochemical interference, we selected some potential inhibitors of microsomal prostaglandin E2 synthase (mPGES)-1. Starting from low affinity natural product 1, by our combined approach we identified the compounds 19 and 20 with biological activity in the low micromolar range. Our data suggest that the 2,3-dihydrobenzofuran derivatives might be suitable bioinspired lead compounds for development of new generation mPGES-1 inhibitors with increased affinity.

0301 basic medicine300323-Dihydrobenzofuran privileged structure; Cancer; Inflammation; Molecular docking; mPGES-1 inhibitors; Biochemistry; Clinical Biochemistry; Molecular Biology; Molecular Medicine; Organic Chemistry; Drug Discovery3003 Pharmaceutical Science; 3003Amino Acid MotifsClinical BiochemistryGene ExpressionPharmaceutical Science01 natural sciencesClinical biochemistryBiochemistry[ CHIM ] Chemical SciencesProtein Structure Secondary[ SDV.CAN ] Life Sciences [q-bio]/Cancerchemistry.chemical_compoundLow affinityDrug DiscoveryEnzyme Inhibitors23-Dihydrobenzofuran privileged structure; Molecular docking; mPGES-1 inhibitors; Cancer; InflammationProstaglandin-E SynthasesCancerAnti-Inflammatory Agents Non-SteroidalBiological activityProto-Oncogene Proteins c-metIntramolecular OxidoreductasesMolecular Docking SimulationMolecular dockingMolecular Medicinelipids (amino acids peptides and proteins)Cell SurvivalStereochemistryMolecular Sequence Data2Antineoplastic Agents[SDV.CAN]Life Sciences [q-bio]/Cancer3-Dihydrobenzofuran privileged structureInhibitory Concentration 50Structure-Activity Relationship03 medical and health sciencesCell Line TumorMicrosomesHumans[CHIM]Chemical SciencesMolecular BiologyBenzofuransInflammationNatural product010405 organic chemistryDrug Discovery3003 Pharmaceutical ScienceOrganic ChemistryEpithelial CellsmPGES-1 inhibitorsCombinatorial chemistryCombined approach0104 chemical sciences030104 developmental biologychemistryDrug DesignDrug Screening Assays Antitumor
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Two New Flavonoids fromBonannia graeca: a DFT-NMR Combined Approach in Solving Structures

2007

Two new cyclized C-geranylated flavonoids, the dihydroflavonol bonanniol C (4a) and the flavanone bonannione B (6a), were isolated as minor compounds from the aerial parts of Bonannia graeca (Umbelliferae). Their structures were elucidated by a combined approach of extensive spectroscopic means and quantum mechanical methods. (© Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2007)

chemistry.chemical_compoundchemistryStereochemistryOrganic ChemistrySettore CHIM/06 - Chimica OrganicaPhysical and Theoretical ChemistryUmbelliferae Bonannia graeca Geranylated flavonoids DFTFlavanoneCombined approachEuropean Journal of Organic Chemistry
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Structural basis for the potential antitumour activity of DNA-interacting benzo[kl]xanthene lignans

2010

The biological properties and possible pharmacological applications of benzo[kl]xanthene lignans, rare among natural products and synthetic compounds, are almost unexplored. In the present contribution, the possible interaction of six synthetic benzo[kl]xanthene lignans and the natural metabolite rufescidride with DNA has been investigated through a combined STD-NMR and molecular docking approach, paralleled by in vitro biological assays on their antiproliferative activity towards two different cancer cell lines: SW 480 and HepG2. Our data suggest that the benzo[kl]xanthene lignans are suitable lead compounds for the design of DNA selective ligands with potential antitumour properties.

XantheneModels MolecularStereochemistryCell SurvivalMetaboliteAntinematodal AgentsOrganic ChemistryDNABiochemistryIn vitroLignanschemistry.chemical_compoundInhibitory Concentration 50Structure-Activity RelationshipchemistryXanthenesBiological propertyCell Line TumorHumansNucleic Acid ConformationPhysical and Theoretical ChemistryCancer cell linesDNA
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