0000000000056136

AUTHOR

Giancarlo Soavi

0000-0003-2434-2251

showing 7 related works from this author

Electrostatic Tuning of the Ligand Binding Mechanism by Glu27 in Nitrophorin 7

2018

AbstractNitrophorins (NP) 1–7 are NO-carrying heme proteins found in the saliva of the blood-sucking insect Rhodnius prolixus. The isoform NP7 displays peculiar properties, such as an abnormally high isoelectric point, the ability to bind negatively charged membranes, and a strong pH sensitivity of NO affinity. A unique trait of NP7 is the presence of Glu in position 27, which is occupied by Val in other NPs. Glu27 appears to be important for tuning the heme properties, but its influence on the pH-dependent NO release mechanism, which is assisted by a conformational change in the AB loop, remains unexplored. Here, in order to gain insight into the functional role of Glu27, we examine the ef…

Models Molecular0301 basic medicineConformational changeProtein ConformationMolecular biologylcsh:MedicineSangCrystallography X-RayLigands01 natural scienceschemistry.chemical_compoundProtein structureModelsZoologiaBloodsucking insectsNitrophorinStatic electricitylcsh:ScienceHemeCell receptorschemistry.chemical_classificationCrystallographyMultidisciplinaryParasitologiaAmino acidBloodRhodniusInsect ProteinsAnimals; Crystallography X-Ray; Glutamic Acid; Heme; Hemeproteins; Insect Proteins; Ligands; Models Molecular; Molecular Dynamics Simulation; Mutation; Protein Conformation; Rhodnius; Salivary Proteins and Peptides; Static ElectricityHemeproteinsHemeproteinStatic ElectricityGlutamic AcidHemeMolecular Dynamics Simulation010402 general chemistryArticle03 medical and health sciencesAnimalsSalivary Proteins and PeptidesBiologia molecularInsectes hematòfags030102 biochemistry & molecular biologylcsh:RMolecular0104 chemical sciencesIsoelectric pointchemistryMutationX-RayBiophysicslcsh:QReceptors cel·lularsParasitologyZoologyScientific Reports
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Structure and dynamics of the membrane attaching nitric oxide transporter nitrophorin 7 [v1; ref status: indexed, http://f1000r.es/508]

2015

Nitrophorins represent a unique class of heme proteins that are able to perform the delicate transportation and release of the free-radical gaseous messenger nitric oxide (NO) in a pH-triggered manner. Besides its ability to bind to phospholipid membranes, the N-terminus contains an additional Leu-Pro-Gly stretch, which is a unique sequence trait, and the heme cavity is significantly altered with respect to other nitrophorins. These distinctive features encouraged us to solve the X-ray crystallographic structures of NP7 at low and high pH and bound with different heme ligands (nitric oxide, histamine, imidazole). The overall fold of the lipocalin motif is well preserved in the different X-r…

lcsh:Rlcsh:Medicinelcsh:QBiomacromolecule-Ligand Interactionslcsh:ScienceChemical Biology of the CellF1000Research
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Strong Exciton-Coherent Phonon Coupling in Single-Layer MoS2

2020

Broadband transient absorption with sub-20fs temporal resolution, supported by ab-initio calculations, quantitatively provides the strength of exciton-coherent phonon coupling in 1L-MoS2, showing a resonant profile around the C exciton.

PhysicsCouplingPhononExcitonCondensed Matter::Mesoscopic Systems and Quantum Hall EffectMolecular physicsPhoton countingCondensed Matter::Materials Sciencesymbols.namesakeTemporal resolutionUltrafast laser spectroscopysymbolsRaman spectroscopyRaman scatteringThe 22nd International Conference on Ultrafast Phenomena 2020
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Structure and dynamics of the membrane attaching nitric oxide transporter nitrophorin 7 [v2; ref status: indexed, http://f1000r.es/5p1]

2015

Nitrophorins represent a unique class of heme proteins that are able to perform the delicate transportation and release of the free-radical gaseous messenger nitric oxide (NO) in a pH-triggered manner. Besides its ability to bind to phospholipid membranes, the N-terminus of NP7, a member of the NO transporter nitrophorin family, contains an additional Leu-Pro-Gly stretch, which is a unique sequence trait, and the heme cavity is significantly altered with respect to other nitrophorins. These distinctive features encouraged us to solve the X-ray crystallographic structures of NP7 at low and high pH and bound with different heme ligands (nitric oxide, histamine, imidazole). The overall fold of…

lcsh:Rlcsh:Medicinelcsh:QBiomacromolecule-Ligand Interactionslcsh:ScienceChemical Biology of the CellF1000Research
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Intravalley spin-flip relaxation dynamics in single-layer WS2

2019

Two-dimensional Transition Metal Dichalcogenides (TMDs) have been widely studied because of the peculiar electronic band structure and the strong excitonic effects [1]. In these materials the large spin-orbit coupling lifts the spin degeneracy of the valence (VB) and the conduction band (CB) giving rise to the A and B interband excitonic transitions. In monolayer WS2, the spins of electrons in the lowest CB and in the highest VB at K/K' point of the Brillouin zone are antiparallel resulting in an intravalley dark exciton state at a lower energy than the bright exciton, see left panel of Fig.1. On the one hand, the presence of dark excitons has been revealed indirectly from the observation o…

PhysicsValence (chemistry)Condensed matter physicsSpinsScatteringExciton02 engineering and technologyElectronCondensed Matter::Mesoscopic Systems and Quantum Hall Effect021001 nanoscience & nanotechnology01 natural sciencesBrillouin zoneCondensed Matter::Materials Science0103 physical sciencesSpin-flip010306 general physics0210 nano-technologyElectronic band structure
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Real-time observation of the intravalley spin-flip process in single-layer WS2

2019

We use helicity-resolved transient absorption spectroscopy to track intravalley scattering dynamics in monolayer WS2. We find that spin-polarized carriers scatter from upper to lower conduction band by reversing their spin orientation on a sub-ps timescale.

Materials scienceCondensed matter physicsScatteringPhysicsQC1-999MonolayerUltrafast laser spectroscopySettore FIS/01 - Fisica SperimentaleProcess (computing)ReversingSpin-flipSpectroscopySpin-½
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Strongly Coupled Coherent Phonons in Single-Layer MoS 2

2019

We present a transient absorption setup combining broadband detection over the visible-UV range with high temporal resolution ($\sim$20fs) which is ideally suited to trigger and detect vibrational coherences in different classes of materials. We generate and detect coherent phonons (CPs) in single layer (1L) MoS$_2$, as a representative semiconducting 1L-transition metal dichalcogenide (TMD), where the confined dynamical interaction between excitons and phonons is unexplored. The coherent oscillatory motion of the out-of-plane $A'_{1}$ phonons, triggered by the ultrashort laser pulses, dynamically modulates the excitonic resonances on a timescale of few tens fs. We observe an enhancement by…

ramanspectroscopyPhononExcitonGeneral Physics and AstronomyFOS: Physical sciences02 engineering and technologyApplied Physics (physics.app-ph)thz phonons010402 general chemistry01 natural sciencesMolecular physicssymbols.namesakephotoinduced bandgap renormalizationtransient absorption spectroscopyUltrafast laser spectroscopyMesoscale and Nanoscale Physics (cond-mat.mes-hall)General Materials Sciencepulsesexciton−phonon interactionPhysicsab initio calculationCondensed Matter - Materials ScienceCondensed Matter - Mesoscale and Nanoscale Physicstransition metal dichalcogenidesgrapheneGeneral Engineeringmonolayer mos2ResonanceMaterials Science (cond-mat.mtrl-sci)excitationmonodynamicsPhysics - Applied Physics021001 nanoscience & nanotechnology0104 chemical sciencesAmplitudeOrders of magnitude (time)coherent phononsexciton-phonon interactionsymbols0210 nano-technologyRaman spectroscopyExcitationACS Nano
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