0000000000117093

AUTHOR

Jean-christophe Lata

showing 4 related works from this author

Agricultural management affects the response of soil bacterial community structure and respiration to water-stress

2013

International audience; Soil microorganisms are responsible for organic matter decomposition processes that regulate soil carbon storage and mineralisation to CO2. Climate change is predicted to increase the frequency of drought events, with uncertain consequences for soil microbial communities. In this study we tested the hypothesis that agricultural management used to enhance soil carbon stocks would increase the stability of microbial community structure and activity in response to water-stress. Soil was sampled from a long-term field trial with three soil carbon management systems and was used in a laboratory study of the effect of a dry wet cycle on organic C mineralisation and microbi…

Agricultural land use010504 meteorology & atmospheric sciencesSoil biodiversity[SDV]Life Sciences [q-bio]Soil biologySoil Science01 natural sciencesMicrobiologyDrying-rewettingFUNCTIONAL STABILITYSoil retrogression and degradation[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyOrganic matterGlobal changeNITROGEN MINERALIZATION0105 earth and related environmental sciences2. Zero hungerchemistry.chemical_classificationC mineralisationCLIMATE-CHANGEMICROBIAL COMMUNITYEcologySoil organic matterLAND-USE CHANGE04 agricultural and veterinary sciencesSoil carbonRESILIENCE15. Life on landDRYING-REWETTING FREQUENCYORGANIC-MATTERAgronomychemistryMicrobial population biology13. Climate action[SDE]Environmental Sciences040103 agronomy & agricultureBacterial community structure0401 agriculture forestry and fisheriesEnvironmental scienceCATABOLIC DIVERSITYCARBON STOCKSMicrocosmStabilitySoil Biology and Biochemistry
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Characterization of Bacterial and Fungal Soil Communities by Automated Ribosomal Intergenic Spacer Analysis Fingerprints: Biological and Methodologic…

2001

ABSTRACT Automated rRNA intergenic spacer analysis (ARISA) was used to characterise bacterial (B-ARISA) and fungal (F-ARISA) communities from different soil types. The 16S-23S intergenic spacer region from the bacterial rRNA operon was amplified from total soil community DNA for B-ARISA. Similarly, the two internal transcribed spacers and the 5.8S rRNA gene (ITS1-5.8S-ITS2) from the fungal rRNA operon were amplified from total soil community DNA for F-ARISA. Universal fluorescence-labeled primers were used for the PCRs, and fragments of between 200 and 1,200 bp were resolved on denaturing polyacrylamide gels by use of an automated sequencer with laser detection. Methodological (DNA extracti…

DNA BacterialRibosomal Intergenic Spacer analysisBiologyPolymerase Chain ReactionApplied Microbiology and Biotechnology03 medical and health sciencesIntergenic regionRNA Ribosomal 16SDNA Ribosomal SpacerMethodsDNA FungalComputingMilieux_MISCELLANEOUSEcosystemSoil Microbiology030304 developmental biology[SDV.EE]Life Sciences [q-bio]/Ecology environmentGenetics[ SDE.BE ] Environmental Sciences/Biodiversity and Ecology0303 health sciencesBacteriaEcology030306 microbiologyFungiReproducibility of ResultsGenes rRNASpacer DNABIOLOGIE MOLECULAIRERibosomal RNADNA FingerprintingDNA extraction[SDV.EE] Life Sciences [q-bio]/Ecology environmentRNA Ribosomal 23SDNA profilingRRNA Operon[SDE.BE]Environmental Sciences/Biodiversity and EcologySoil microbiologyFood ScienceBiotechnologyApplied and Environmental Microbiology
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Increase inabovegroundfreshlitterquantityover-stimulatessoil respiration inatemperatedeciduousforest

2010

In the context of climate change, the amount of carbon allocated to soil, particularly fresh litter, is predicted to increase with terrestrial ecosystem productivity, and may alter soil carbon storage capacities. In this study we performed a 1-year litter-manipulation experiment to examine how soil CO2 efflux was altered by the amount of fresh litter. Three treatments were applied: litter exclusion (E), control (C, natural amount: 486 g m −2 ) and litter addition (A, twice the natural amount: 972 g m −2

010504 meteorology & atmospheric sciencesEcologyEcologySoil biologySoil Science04 agricultural and veterinary sciencesSoil carbon15. Life on landPlant litter01 natural sciencesAgricultural and Biological Sciences (miscellaneous)6. Clean water[ SDE ] Environmental SciencesSoil respirationAgronomy13. Climate actionSoil water[SDE]Environmental Sciences040103 agronomy & agricultureLitter0401 agriculture forestry and fisheriesEnvironmental scienceTerrestrial ecosystemEcosystem0105 earth and related environmental sciences
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Seasonal dynamics of the bacterial community in forest soils under different quantities of leaf litter

2010

International audience; Soil microbial communities play an important role in soil carbon functioning, particularly in forest ecosystems. Their variation in response to climate change may affect soil carbon processes, highlighting the importance of understanding how environmental factors affect microbial communities. This study aimed to determine to what extent an increase in the quantity of fresh litter may affect heterotrophic mineralization of organic carbon and bacterial community structure in soil and litter. A litter manipulation experiment was performed in situ in a temperate deciduous forest. Three treatments of fresh litter inputs were considered: litter exclusion, natural condition…

[SDE] Environmental SciencesLITTER[SDV]Life Sciences [q-bio]FORET TEMPEREE DE FEUILLUSSoil ScienceBACTERIAL COMMUNITY STRUCTURE AND FUNCTIONINGTemperate deciduous forestTEMPERATE DECIDUOUS FORESTSoil respiration[ SDE ] Environmental Sciences03 medical and health sciencesForest ecology030304 developmental biology2. Zero hunger0303 health sciencesEcologyEcologyCommunity structure04 agricultural and veterinary sciencesSoil carbonMineralization (soil science)15. Life on landPlant litterAgricultural and Biological Sciences (miscellaneous)SOIL13. Climate actionARISASoil water[SDE]Environmental Sciences040103 agronomy & agriculture0401 agriculture forestry and fisheriesEnvironmental scienceSOIL RESPIRATION
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