0000000000132275

AUTHOR

Miguel Vences

showing 13 related works from this author

Phylogeography of Ptychadena mascareniensis suggests transoceanic dispersal in a widespread African-Malagasy frog lineage

2004

Aim The Mascarene ridged frog, Ptychadena mascareniensis, is the only African amphibian species thought to occur on Madagascar and on the Seychelles and also Mascarene islands. We explored its phylogenetic relationships and intraspecific genetic differentiation to contribute to the understanding of transoceanic dispersal in amphibians. Methods Fragments of the mitochondrial 16S rRNA gene were sequenced from specimens collected over most of the distribution area of P. mascareniensis, including populations from Madagascar, Mascarenes and Seychelles. Results We identified five deeply divergent clades having pairwise divergences >5%, which probably all represent cryptic species in a P. mascaren…

AmphibianSpecies complexEcologybiologyLineage (evolution)BiogeographyZoologybiology.organism_classificationPhylogeographyPtychadenabiology.animalparasitic diseasesBiological dispersalPtychadena mascareniensisEcology Evolution Behavior and SystematicsJournal of Biogeography
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Testing alternative vicariance scenarios in Western Mediterranean discoglossid frogs

2004

Dated molecular phylogenies are often used to interpret evolutionary history with respect to paleogeographic events. Where more than one interpretation is possible, it is desirable but difficult to assess the alternatives in an objective manner. The present work demonstrates a formalized method for testing molecular clock calibrations and biogeographic scenarios based on them. We assessed the plausibility of several previously published biogeographic hypotheses, using the frog genera Alytes, Discoglossus, and Bombina as model groups. Our data set comprised ca. 900bp of partial mitochondrial 16S and 12S rRNA gene sequences (both genes evolved in a clock-like manner across genera) from nearly…

EcologyMediterranean RegionMolecular Sequence DataSubspeciesBiologybiology.organism_classificationBiological EvolutionModels BiologicalEvolution MolecularTaxonPhylogeneticsRNA RibosomalRNA Ribosomal 16SGeneticsVicarianceDiscoglossusAnimalsBombinatoridaeAnuraMolecular clockMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenyStatistical hypothesis testingMolecular Phylogenetics and Evolution
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Out of Asia: Mitochondrial DNA Evidence for an Oriental Origin of Tiger Frogs, Genus Hoplobatrachus

2001

Most examples of intercontinental dispersal events after the Miocene contact between Africa and Asia involve mammal lineages. Among amphibians, a number of probably related groups are known from both continents, but their phylogenies are so far largely unresolved. To test the hypothesis of Miocene dispersal against a Mesozoic vicariance scenario in the context of Gondwana fragmentation, we analyzed fragments of the mitochondrial 16S rRNA gene (572 bp) in 40 specimens of 34 species of the anuran family Ranidae. Results corroborated the monophyly of tiger frogs (genus Hoplobatrachus), a genus with representatives in Africa and Asia. The African H. occipitalis was the sister group of the Asian…

Base SequencebiologyEcologyFejervaryaZoologybiology.organism_classificationDNA MitochondrialMonophylyEuphlyctisSpecies SpecificitySister groupHylaranaHoplobatrachusRNA Ribosomal 16SGeneticsVicarianceAnimalsBiological dispersalAnuraMolecular BiologyEcology Evolution Behavior and SystematicsDNA PrimersMolecular Phylogenetics and Evolution
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Molecular phylogeny of Malagasy poison frogs, genus Mantella (Anura: Mantellidae): homoplastic evolution of colour pattern in aposematic amphibians

2002

Abstract We studied the evolution of colour pattern in Malagasy poison frogs, genus Mantella , a group of diurnal and toxic frogs endemic to Madagascar. Based on a phylogeny reconstructed using 1130 bp of the mitochondrial 16S rRNA gene, the genus can be divided into five species groups. Within some of these groups, interspecific genetic divergences were very low (1.2–2.8% sequence divergence) while colour patterns were markedly different. In contrast, Mantella madagascariensis and M . baroni , two species which show extremely similar dorsal coloration patterns, were not included in the same clade. This conclusion was supported by high bootstrap values and by significant rejection of altern…

MantellabiologyMantellidaeMantellidaeZoologybiology.organism_classificationphylogenyMüllerian mimicryAmphibiaPhylogeneticsSympatric speciationGenusMolecular phylogeneticsMadagascaraposematism16S rRNACladeEcology Evolution Behavior and SystematicsmimicryOrganisms Diversity & Evolution
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Reconciling fossils and molecules: Cenozoic divergence of cichlid fishes and the biogeography of Madagascar

2001

Aim The biogeographical origins of the extant vertebrates endemic to Madagascar are largely unsolved, but have often been related to vicariance in the context of fragmentation of the supercontinent Gondwana in the Mesozoic. Such hypotheses are especially appealing in the case of cichlid fishes, which show phylogenetic relationships reflecting the temporal successions of the breakup of Gondwana. We used molecular clock data to test this assumption. Location Fragments of the 16S rRNA gene and of the nuclear Tmo-4C4 locus, partly obtained from Genbank from South American, African, Malagasy and Indian cichlids were analysed. Methods Based on monophyletic cichlid radiations in African lakes, we …

EcologyBiogeographyVertebrateZoologyBiologybiology.organism_classificationSupercontinentGondwanaSister groupCichlidbiology.animalVicarianceMolecular clockhuman activitiesEcology Evolution Behavior and SystematicsJournal of Biogeography
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First Data on the Molecular Phylogeography of Scincid Lizards of the Genus Mabuya

2000

A 487-bp fragment of the mitochondrial 16S rRNA gene was sequenced in 26 species of the circumtropical lizard genus Mabuya and used to analyze phylogenetic relationships within the genus. The species from Africa and Madagascar formed a monophyletic group relative to the included Asian and South American taxa. The Malagasy species included (M. elegans, M. cf. dumasi, and M. comorensis) did not appear as a monophylum. Combined and separate analysis of the 16S data and additional sequences of the mitochondrial 12S rRNA, ND4, and cytochrome b genes (a total of 2255 bp) in one Asian, two Malagasy, and two African species also did not result consistently in a monophyletic grouping of the Malagasy…

RNA MitochondrialMabuyaZoologyMonophylyGenusRNA Ribosomal 16Sbiology.animalMadagascarGeneticsAnimalsMolecular BiologyPhylogenyEcology Evolution Behavior and SystematicsbiologyPhylogenetic treeLizardCytochrome bLizardsNADH DehydrogenaseEmigration and ImmigrationCytochrome b Groupbiology.organism_classificationBiological EvolutionPhylogeographyTaxonRNA RibosomalAfricaRNAMolecular Phylogenetics and Evolution
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Convergent evolution of aposematic coloration in Neotropical poison frogs: a molecular phylogenetic perspective

2003

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Species complexbiologyColostethusColostethus prattiDendrobatidaeaposematic colorZoologybiology.organism_classificationphylogenyHylodinaeskin toxinsEpipedobatesAmphibiaMonophylySister groupMannophryneEcology Evolution Behavior and SystematicsNephelobates
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Phylogeny and classification of poison frogs (Amphibia: dendrobatidae), based on mitochondrial 16S and 12S ribosomal RNA gene sequences.

2000

An analysis of partial sequences of the 16S ribosomal rRNA gene (582 bp) of 20 poison frog species (Dendrobatidae) confirmed their phylogenetic relationships to bufonid and leptodactylid frogs. Representatives of the ranoid families and subfamilies Raninae, Mantellinae, Petropedetinae, Cacosterninae, Arthroleptidae, Astylosternidae, and Microhylidae did not cluster as sister group of the Dendrobatidae. Similar results were obtained in an analysis using a partial sequence of the 12S gene (350 bp) in a reduced set of taxa and in a combined analysis. Within the Dendrobatidae, our data supported monophyly of the genus Phyllobates but indicated paraphyly of Epipedobates and Colostethus. Minyobat…

PhyllobatesArthroleptidaebiologyColostethusMicrohylidaeDendrobatesMolecular Sequence DataZoologyDNASequence Analysis DNAbiology.organism_classificationMitochondriaEpipedobatesAmphibiansMantellinaeRNA RibosomalRNA Ribosomal 16SGeneticsAnimalsAllobatesMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenyMolecular phylogenetics and evolution
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Mitochondrial DNA sequence data support the allocation of Greek mainland chameleons to Chamaeleo africanus

1999

Arnold, E.N., Burton, J.A. (1978): Reptiles and Amphibians of Britain and Europe. London, Collins & Sons.Bruno, S., Maugeri, S. (1990): Guida ai serpenti d’ Italia e d’ Europa. Milano, Editoriale Giorgio Mondadori.Carpenter, C.C., Ferguson, G.W. (1977): Variation and evolution of stereotyped behaviour in reptiles. In: Biologyof theReptilia, Vol. 7, p. 335-554. Gans, C., Tinkle, D.W.,Eds, London, New York, San Francisco, AcademicPress.Tomaselli, R., Balduzzi, A., Filipello, S. (1973): Carta Bioclimatica d’ Italia. Collana Verde 33, MinisteroAgricoltura eForeste, Roma.

Mitochondrial DNAData sequencesEcologyStereotyped behaviourAnimal Science and ZoologyMainlandChamaeleoBiologybiology.organism_classificationEcology Evolution Behavior and SystematicsAmphibia-Reptilia
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Exploring the potential of life-history key innovation: brook breeding in the radiation of the Malagasy treefrog genus Boophis

2002

The treefrog genus Boophis is one of the most species-rich endemic amphibian groups of Madagascar. It consists of species specialized to breeding in brooks (48 species) and ponds (10 species). We reconstructed the phylogeny of Boophis using 16S ribosomal DNA sequences (558 bp) from 27 species. Brook-breeders were monophyletic and probably derived from an ancestral pond-breeding lineage. Pond-breeders were paraphyletic. The disparity in diversification among pond-breeders and brook-breeders was notable among endemic Malagasy frogs, although it was not significant when considering Boophis alone. Sibling species which have different advertisement calls but are virtually indistinguishable by mo…

MaleParaphylyLineage (evolution)MantellidaeMolecular Sequence DataMantellidaeZoologyFresh WaterBreedingphylogenyAmphibiaMonophylysibling speciesGenusddc:570RNA Ribosomal 16SMadagascarGeneticsAnimalsPhylogenyEcology Evolution Behavior and SystematicsKey innovationLikelihood FunctionsbiologyReproductionGenetic Variationbiology.organism_classificationGenetic divergenceBoophisFemaleAnuraMolecular Ecology
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Climatic oscillations triggered post-Messinian speciation of Western Palearctic brown frogs (Amphibia, Anura, Ranidae)

2003

Abstract Oscillating glacial cycles over the past 2.4 million years are proposed to have had a major impact on the diversity of contemporary species communities. We used mitochondrial and nuclear DNA sequence data to infer phylogenetic relationships within Western Palearctic brown frogs and to test the influence of Pliocene and Pleistocene climatic changes on their evolution. We sequenced 1976 bp of the mitochondrial genes 16S rRNA and cytochrome b and of the nuclear rhodopsin gene for all current species and subspecies. Based on an established allozyme clock for Western Palearctic water frogs and substitution rate constancy among water frogs and brown frogs, we calibrated a molecular clock…

RhodopsinRanidaeClimateLineage (evolution)Rana italicaRana arvalisDNA MitochondrialPolymerase Chain ReactionEvolution MolecularRNA Ribosomal 16SGeneticsVicarianceAnimalsProtein IsoformsMolecular clockMolecular BiologyPhylogenyEcology Evolution Behavior and SystematicsBase SequencebiologyEcologyDNACytochrome b Groupbiology.organism_classificationRana dalmatinaRana latasteiRana graeca
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Molecular phylogeny of hyperoliid treefrogs: biogeographic origin of Malagasy and Seychellean taxa and re-analysis of familial paraphyly

2003

Treefrogs of the family Hyperoliidae are distributed in Africa, Madagascar and the Seychelles. In this study, their phylogeny was studied using sequences of fragments of the mitochondrial 16Sand 12SrRNA and cytochrome b genes. The molecular data strongly confirmed monophyly of the subfamily Hyperoliinae but indicated that the genus Leptopelis (subfamily Leptopelinae) is more closely related to species of the African family Astylosternidae. The Seychellean genus Tachycnemis was the sister group of the Malagasy Heterixalus in all molecular analyses; this clade was deeply nested within the Hyperoliinae. A re-evaluation of the morphological data did not contradict the sister group relationships…

ParaphylySubfamilybiologyHyperoliidaeZoologyHeterixalusbiology.organism_classificationMonophylySister groupMolecular phylogeneticsGeneticsAnimal Science and ZoologyLeptopelisMolecular BiologyEcology Evolution Behavior and SystematicsJournal of Zoological Systematics and Evolutionary Research
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Multiple overseas dispersal in amphibians

2003

Amphibians are thought to be unable to disperse over ocean barriers because they do not tolerate the osmotic stress of salt water. Their distribution patterns have therefore generally been explained by vicariance biogeography. Here, we present compelling evidence for overseas dispersal of frogs in the Indian Ocean region based on the discovery of two endemic species on Mayotte. This island belongs to the Comoro archipelago, which is entirely volcanic and surrounded by sea depths of more than 3500 m. This constitutes the first observation of endemic amphibians on oceanic islands that did not have any past physical contact to other land masses. The two species of frogs had previously been tho…

MovementBiogeographyMolecular Sequence DataMantellidaeBiologyphylogenyDNA MitochondrialComorosGeneral Biochemistry Genetics and Molecular BiologyEvolution MolecularAmphibiaddc:570MadagascarVicarianceAnimalsIndian OceanPhylogenybiogeographyDNA PrimersGeneral Environmental ScienceLikelihood FunctionsBase SequenceGeographyModels GeneticGeneral Immunology and MicrobiologyEcologySequence Analysis DNAGeneral MedicineSalt waterBiological dispersalAnuraGeneral Agricultural and Biological SciencesResearch Article
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