0000000000189552

AUTHOR

Araceli Lamelas

showing 11 related works from this author

Comparative Genomics of Serratia spp.: Two Paths towards Endosymbiotic Life

2012

Symbiosis is a widespread phenomenon in nature, in which insects show a great number of these associations. Buchnera aphidicola, the obligate endosymbiont of aphids, coexists in some species with another intracellular bacterium, Serratia symbiotica. Of particular interest is the case of the cedar aphid Cinara cedri, where B. aphidicola BCc and S. symbiotica SCc need each other to fulfil their symbiotic role with the insect. Moreover, various features seem to indicate that S. symbiotica SCc is closer to an obligate endosymbiont than to other facultative S. symbiotica, such as the one described for the aphid Acirthosyphon pisum (S. symbiotica SAp). This work is based on the comparative genomi…

Genome evolutionEvolutionary ProcessesSerratialcsh:MedicineGenomicsBiologyForms of EvolutionGenomeMicrobiologyEvolution Molecular03 medical and health sciencesBuchneraPhylogeneticsAnimalslcsh:ScienceSymbiosisGenome sizeBiologyGenome EvolutionPhylogeny030304 developmental biologyGeneticsComparative genomics0303 health sciencesEvolutionary BiologyMultidisciplinaryObligate030306 microbiologylcsh:RComputational BiologyGenomicsComparative Genomicsbiology.organism_classificationAphidsMicrobial Evolutionlcsh:QBuchneraGenome BacterialResearch ArticleCoevolutionPLoS ONE
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Serratia symbiotica from the aphid Cinara cedri: a missing link from facultative to obligate insect endosymbiont.

2011

The genome sequencing of Buchnera aphidicola BCc from the aphid Cinara cedri, which is the smallest known Buchnera genome, revealed that this bacterium had lost its symbiotic role, as it was not able to synthesize tryptophan and riboflavin. Moreover, the biosynthesis of tryptophan is shared with the endosymbiont Serratia symbiotica SCc, which coexists with B. aphidicola in this aphid. The whole-genome sequencing of S. symbiotica SCc reveals an endosymbiont in a stage of genome reduction that is closer to an obligate endosymbiont, such as B. aphidicola from Acyrthosiphon pisum, than to another S. symbiotica, which is a facultative endosymbiont in this aphid, and presents much less gene decay…

Cancer ResearchSerratialcsh:QH426-470RiboflavinPseudogeneGenomeDNA sequencingBacterial ProteinsBuchneraEnterobacteriaceaePhylogeneticsBotanyGeneticsAnimalsAmino AcidsSymbiosisMolecular BiologyPhylogenyGenetics (clinical)Ecology Evolution Behavior and SystematicsGeneticsComparative genomicsObligatebiologyTryptophanbiology.organism_classificationBiological EvolutionAcyrthosiphon pisumlcsh:GeneticsAphidsBuchneraGenome BacterialMetabolic Networks and PathwaysPseudogenesPLoS Genetics
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The Striking Case of Tryptophan Provision in the Cedar Aphid Cinara cedri

2008

ABSTRACT Buchnera aphidicola BCc has lost its symbiotic role as the tryptophan supplier to the aphid Cinara cedri . We report the presence of a plasmid in this endosymbiont that contains the trpEG genes. The remaining genes for the pathway ( trpDCBA ) are located on the chromosome of the secondary endosymbiont “ Candidatus Serratia symbiotica.” Thus, we propose that a symbiotic consortium is necessary to provide tryptophan.

Molecular Sequence DataGenetics and Molecular BiologyMicrobiologySerratiaMicrobiologyPlasmidBuchneraSymbiosisAnimalsSymbiosisMolecular BiologyGeneIn Situ HybridizationAphidModels GeneticbiologyfungiTryptophanTryptophanbiochemical phenomena metabolism and nutritionbiology.organism_classificationGenes BacterialAphidsCandidatusbacteriaBuchneraPlasmidsJournal of Bacteriology
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Impact of Rearing Conditions on the Ambrosia Beetle’s Microbiome

2018

Ambrosia beetles, along with termites and leafcutter ants, are the only fungus-farming lineages within the tree of life. Bacteria harbored by ambrosia beetles may play an essential role in the nutritional symbiotic interactions with their associated fungi

0106 biological sciences0301 basic medicineXyleborus bispinatusZoologyFungusXyleborus volvulus<i>Xyleborus</i> sp.Ambrosia beetle01 natural sciencesArticleGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesmicrobiotaAmbrosiaMicrobiomelcsh:ScienceEcology Evolution Behavior and SystematicsmetagenomicsbiologyXyleborus affinisfungifungusPaleontologybiology.organism_classificationXyleborus sp.metabolic capabilities010602 entomology030104 developmental biologySpace and Planetary ScienceMetagenomicslcsh:QLife
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Evolution of the Secondary Symbiont “Candidatus Serratia symbiotica” in Aphid Species of the Subfamily Lachninae ▿†

2008

ABSTRACT Buchnera aphidicola BCc, the primary endosymbiont of the aphid Cinara cedri (subfamily Lachninae), is losing its symbiotic capacity and might be replaced by the coresident “ Candidatus Serratia symbiotica.” Phylogenetic and morphological analyses within the subfamily Lachninae indicate two different “ Ca . Serratia symbiotica” lineages and support the longtime coevolution of both symbionts in C. cedri .

SubfamilySerratiaMolecular Sequence DataApplied Microbiology and BiotechnologySerratiaEvolution MolecularSymbiosisBuchneraPhylogeneticsRNA Ribosomal 16SBotanyInvertebrate MicrobiologyAnimalsSymbiosisCoevolutionPhylogenyGeneticsAphidEcologybiologyPhylogenetic treeGenes rRNASequence Analysis DNAbiology.organism_classificationAphidsBuchneraFood ScienceBiotechnology
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Shifts in the structure of rhizosphere bacterial communities of avocado after Fusarium dieback

2021

The rhizosphere microbiome is critical for plant growth and protection against plant pathogens. However, rhizosphere microbial communities are likely to be restructured upon plant infection by fungal pathogens. Our objective was to determine the shifts in rhizosphere bacterial communities of avocado trees (Persea americana Mill.) after Fusarium dieback (FD), a disease triggered by the symbiotic fungi of invasive ambrosia beetles (Euwallacea kuroshio and Euwallacea sp. nr. fornicatus), using 16S rDNA gene amplicon sequencing and a culture-dependent approach. Rhizosphere soil samples were collected from five asymptomatic and five FD-symptomatic avocado trees in a Californian orchard. Sequence…

0106 biological sciencesFusariumRhizospherePerseabiologyBiological pest controlSoil Sciencefood and beverages04 agricultural and veterinary sciencesPlant ScienceLysobacterbiology.organism_classificationRhizoctonia01 natural sciencesFusarium oxysporumBotany040103 agronomy & agriculture0401 agriculture forestry and fisheriesOrchardAgronomy and Crop Science010606 plant biology & botany
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The bacterial microbiome of meloidogyne-based disease complex in coffee and tomato

2020

The Meloidogyne-based disease complexes (MDCs) are caused by the interaction of different root-knot nematode species and phytopathogenic fungi. These complexes are devastating several important crops worldwide including tomato and coffee. Despite their relevance, little is known about the role of the bacterial communities in the MDCs. In this study 16s rDNA gene sequencing was used to analyze the bacterial microbiome associated with healthy and infested roots, as well with females and eggs of Meloidogyne enterolobii and M. paranaensis, the causal agents of MDC in tomato and coffee, respectively. Each MDC pathosystems displayed a specific taxonomic diversity and relative abundances constitut…

0106 biological sciences0301 basic medicineMeloidogynePathologie végétalePlant Sciencelcsh:Plant culture01 natural scienceshttp://aims.fao.org/aos/agrovoc/c_479203 medical and health sciencesMaladie des planteshttp://aims.fao.org/aos/agrovoc/c_5962Meloidogyne paranaensisSolanum lycopersicumcorky rootAlteromonadalesBotanyhttp://aims.fao.org/aos/agrovoc/c_1721lcsh:SB1-1110MicrobiomeH20 - Maladies des planteshttp://aims.fao.org/aos/agrovoc/c_4475Original Researchfunctional profilehttp://aims.fao.org/aos/agrovoc/c_4729biologypathobiomeP34 - Biologie du solfood and beveragesNocardiaCoffea arabicabiology.organism_classification16S ribosomal RNABacillalesMeloidogyne enterolobiiBurkholderiales030104 developmental biologyNematodehttp://aims.fao.org/aos/agrovoc/c_5974Meloidogyne enterolobii010606 plant biology & botany
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New Clues about the Evolutionary History of Metabolic Losses in Bacterial Endosymbionts, Provided by the Genome of Buchnera aphidicola from the Aphid…

2011

ABSTRACT The symbiotic association between aphids (Homoptera) and Buchnera aphidicola ( Gammaproteobacteria ) started about 100 to 200 million years ago. As a consequence of this relationship, the bacterial genome has undergone a prominent size reduction. The downsize genome process starts when the bacterium enters the host and will probably end with its extinction and replacement by another healthier bacterium or with the establishment of metabolic complementation between two or more bacteria. Nowadays, several complete genomes of Buchnera aphidicola from four different aphid species ( Acyrthosiphon pisum , Schizaphis graminum , Baizongia pistacea , and Cinara cedri ) have been fully seque…

DNA BacterialMolecular Sequence DataBacterial genome sizeApplied Microbiology and BiotechnologyGenomeEvolution MolecularBuchneraPhylogeneticsAnimalsEvolutionary and Genomic MicrobiologySymbiosisPhylogenyWhole genome sequencingGeneticsComparative genomicsEcologyPhylogenetic treebiologySequence Analysis DNAbiochemical phenomena metabolism and nutritionbiology.organism_classificationAcyrthosiphon pisumAphidsBuchneraGenome BacterialFood ScienceBiotechnologyApplied and Environmental Microbiology
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A genomic reappraisal of symbiotic function in the aphid/Buchnera symbiosis: reduced transporter sets and variable membrane organisations.

2011

International audience; Buchnera aphidicola is an obligate symbiotic bacterium that sustains the physiology of aphids by complementing their exclusive phloem sap diet. In this study, we reappraised the transport function of different Buchnera strains, from the aphids Acyrthosiphon pisum, Schizaphis graminum, Baizongia pistaciae and Cinara cedri, using the re-annotation of their transmembrane proteins coupled with an exploration of their metabolic networks. Although metabolic analyses revealed high interdependencies between the host and the bacteria, we demonstrate here that transport in Buchnera is assured by low transporter diversity, when compared to free-living bacteria, being mostly bas…

multidisciplinary scienceslcsh:MedicinePlant ScienceinterdépendanceBiochemistryTransmembrane Transport ProteinsBacterial Physiologylcsh:ScienceIntegral membrane proteinGeneticsbactérie0303 health sciencesPlant PestsMultidisciplinaryMicroscopy ConfocalbiologyMembrane transport protein030302 biochemistry & molecular biologybuchnera aphidicolamicroscopy confocalGenomicsHydrogen-Ion ConcentrationTransmembrane proteinFunctional GenomicsBiochemistrysymbiosis geneticsMetabolic PathwaysMetabolic Networks and PathwaysResearch Articlecell membrane ultrastructurescience and technologyMicrobiology03 medical and health sciencesMetabolic NetworksBuchneraAnimalsSymbiosisBiology030304 developmental biologyObligateCell Membranelcsh:RProteinsComputational BiologyMembrane Transport ProteinsBiological TransportBacteriologyPlant Pathologybiochemical phenomena metabolism and nutritionbiology.organism_classificationAcyrthosiphon pisumTransmembrane ProteinsaphidsMESH: SymbioseMetabolismMembrane proteinGenes Bacterialbiology.proteinlcsh:QBuchnerabuchnera aphidicola;aphids;microscopy confocal;symbiosis genetics;cell membrane ultrastructure;multidisciplinary sciences;science and technologyFunction (biology)[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/SymbiosisPLoS ONE
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Evidence for Succession and Putative Metabolic Roles of Fungi and Bacteria in the Farming Mutualism of the Ambrosia Beetle Xyleborus affinis.

2020

The bacterial and fungal community involved in ambrosia beetle fungiculture remains poorly studied compared to the famous fungus-farming ants and termites. Here we studied microbial community dynamics of laboratory nests, adults, and brood during the life cycle of the sugarcane shot hole borer, Xyleborus affinis. We identified a total of 40 fungal and 428 bacterial operational taxonomic units (OTUs), from which only five fungi (a Raffaelea fungus and four ascomycete yeasts) and four bacterial genera (Stenotrophomonas, Enterobacter, Burkholderia, and Ochrobactrum) can be considered the core community playing the most relevant symbiotic role. Both the fungal and bacterial populations varied s…

0106 biological sciences0301 basic medicinePhysiologyAmbrosia fungimicrobiomeFungicultureFungusBiologyAmbrosia beetle010603 evolutionary biology01 natural sciencesBiochemistryMicrobiologyHost-Microbe Biology03 medical and health sciencesmycobiomeSymbiosisBotanyGeneticsAmbrosiaInternal transcribed spacerXyleborus affinisMolecular BiologyEcology Evolution Behavior and SystematicsMutualism (biology)fungibiology.organism_classificationQR1-502Computer Science Applications030104 developmental biologyModeling and SimulationResearch Article
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Genomics of intracellular symbionts in insects

2010

Endosymbiotic bacteria play a vital role in the evolution of many insect species. For instance, endosymbionts have evolved metabolically to complement their host's natural diet, thereby enabling them to explore new habitats. In this paper, we will review and give some examples of the nature of the metabolic coupling of different primary and secondary endosymbionts that have evolved in hosts with different nutritional diets (i.e., phloem, xylem, blood, omnivores, and grain). Particular emphasis is given to the evolutionary functional convergence of phylogenetically distant endosymbionts, which are evolving in hosts with similar diets.

Microbiology (medical)Insectamedia_common.quotation_subjectGenomicsInsectBiologyBacterial Physiological PhenomenaMicrobiology03 medical and health sciencesAnimalsSymbiosis030304 developmental biologymedia_common0303 health sciencesEndosymbiosisBacteria030306 microbiologyEcologyHost (biology)fungifood and beveragesXylemGeneral MedicineGenomicsbiochemical phenomena metabolism and nutritionInfectious DiseasesEvolutionary biologyPhloemOmnivoreFunctional genomicsMetabolic Networks and Pathways
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