0000000000217305

AUTHOR

Danute Labeikyte

showing 2 related works from this author

Development-dependent changes in the tight DNA-protein complexes of barley on chromosome and gene level

2008

Abstract Background The tightly bound to DNA proteins (TBPs) is a protein group that remains attached to DNA with covalent or non-covalent bonds after its deproteinisation. The functional role of this group is as yet not completely understood. The main goal of this study was to evaluate tissue specific changes in the TBP distribution in barley genes and chromosomes in different phases of shoot and seed development. We have: 1. investigated the TBP distribution along Amy32b and Bmy1 genes encoding low pI α-amylase A and endosperm specific β-amylase correspondingly using oligonucleotide DNA arrays; 2. characterized the polypeptide spectrum of TBP and proteins with affinity to TBP-associated D…

DNA PlantTranscription GeneticPlant ScienceBiologyGenes PlantChromosomes Plantchemistry.chemical_compoundGene Expression Regulation Plantlcsh:BotanyGene expressionPromoter Regions GeneticGeneOligonucleotide Array Sequence AnalysisPlant ProteinsOligonucleotideIntronGene Expression Regulation Developmentalfood and beveragesChromosomeHordeumPromoterExonsNuclear matrixMolecular biologyIntronslcsh:QK1-989DNA-Binding ProteinschemistryBiochemistrySeedsPlant ShootsDNAMicrosatellite RepeatsResearch ArticleBMC Plant Biology
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Tightly bound to DNA proteins: possible universal substrates for intranuclear processes.

2011

Tightly bound to DNA proteins (TBPs) are a protein group that remains attached to DNA after its deproteinization by phenol, chloroform or salting-out. TBP are bound to DNA with covalent phosphotriester or non-covalent ion and hydrogen bonds. They appear to be a vast protein group involved in numerous intranuclear processes. The TBPs fraction co-purified with DNA deproteinized by mild procedures is extremely heterogeneous, tissue and species-specific. The protein fraction co-purified with DNA after harsh deproteinization procedures appears to be formed from few polypeptides common to different species and tissues. Interaction sites between DNA and TBPs depend on the physiological status of t…

Cell NucleusTranscription GeneticHydrogen bondPhosphataseCellGeneral MedicineBiologyNuclear matrixModels BiologicalPhosphoric Monoester HydrolasesDNA-Binding Proteinschemistry.chemical_compoundmedicine.anatomical_structurechemistryBiochemistrySpecies SpecificityTranscription (biology)Covalent bondOrgan SpecificityGeneticsmedicineAnimalsBinding siteDNASerpinsGene
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