0000000000278422

AUTHOR

Durdica Ugarkovic

showing 10 related works from this author

FORMATION OF A SMALL RIBONUCLEOPROTEIN PARTICLE BETWEEN TAT PROTEIN AND TRANS-ACTING RESPONSE ELEMENT IN HUMAN IMMUNODEFICIENCY VIRUS-INFECTED CELLS

1991

The trans-acting response element (TAR) within the long terminal repeat of human immunodeficiency virus (HIV) is present in all 5' termini of HIV mRNAs and is recognized by the viral Tat protein. Now we describe that the 59-nucleotide-long TAR-RNA exists as a ribonucleoprotein particle in polysomal and heterogeneous nuclear RNP fractions of HIV-1-infected HeLa-T4+ cells. Applying an immunoprecipitation technique this Tat.TAR complex could be isolated from total cell extracts as well as from polysomal or heterogeneous nuclear RNP fractions. The chain length and the identity of the TAR-RNA were established by RNase protection assays while the Tat protein was confirmed by Western blotting tech…

chemistry.chemical_classificationMessenger RNAImmunoprecipitationvirusesResponse elementRibonucleoprotein particleCell BiologyBiologycomplex mixturesBiochemistryMolecular biologyLong terminal repeatchemistry.chemical_compoundchemistryotorhinolaryngologic diseasesNucleotideMolecular BiologyDNARibonucleoprotein
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Demonstration of an endocrine signaling circuit for insulin in the sponge Geodia cydonium.

1989

Abstract The existence of an insulin-mediated cell-to-cell signaling in the sponge Geodia cydonium is demonstrated in this study by molecular biological and immunological techniques. The sequence of a sponge cDNA clone encoding preproinsulin was analyzed for the first time and determined to comprise a high homology to human preproinsulin (60-80% homology). The predicted polypeptide of preproinsulin from sponge contains two disulfide bridges which link the A- to the B-chain. The intra-A chain disulfide bridge is absent. Applying immunological and electron microscopical techniques it is shown that insulin is produced in specialized cells (spherulous cells). Experimental evidence is presented …

PreproinsulinAnnexinsCellular differentiationBlotting WesternMolecular Sequence DataBiologyGeneral Biochemistry Genetics and Molecular BiologySequence Homology Nucleic AcidAnimalsHumansInsulinAmino Acid SequenceProtein PrecursorsReceptorMolecular BiologyPancreatic hormoneProinsulinGeneral Immunology and MicrobiologyBase SequenceGeneral NeuroscienceCalcium-Binding ProteinsDNAImmunohistochemistryReceptor InsulinPoriferaMicroscopy ElectronBiochemistryGene Expression RegulationHormone receptorSignal transductionHormoneResearch ArticleProinsulinSignal Transduction
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Evidence for involvement of a nuclear envelope-associated RNA helicase activity in nucleocytoplasmic RNA transport

1990

It seems well established that translocation of at least some mRNAs through the nuclear pore is (1) an energy-dependent process, and (2) dependent on the presence of the poly(A) segment attached to most mRNA species. We describe that RNA helicase (RNA duplex unwindase) activity is present in a nuclear envelope (NE) preparation, which also appears to be involved in nucleocytoplasmic RNA transport. This activity unwinds RNA: RNA hybrids. The helicase has a pH optimum of 7.5 and a temperature optimum of 30 degrees C. Applying the sealed NE vesicle system, it was shown that duplex RNA species are readily released from the vesicles in an unidirectional manner, in contrast to single-stranded RNA,…

PhysiologyClinical BiochemistryRNARNA-dependent RNA polymeraseRNA transportCell BiologyBiologyNon-coding RNARNA Helicase ABiochemistryRNA polymerase IBiophysicsDegradosomeSmall nuclear RNAJournal of Cellular Physiology
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Protection of HeLa‐T4 + cells against human immunodeficiency virus (HIV) infection after stable transfection with HIV LTR‐2‘,5‘‐oligoadenylate synthe…

1990

An expression vector (pU3R-III/2-5AS) of human 2',5'-oligoadenylate (2-5A) synthetase was constructed in which a cDNA encoding an active form of the enzyme was located 3' to a 3'-long terminal repeat (LTR) of human immunodeficiency virus type 1 (HIV-1). The LTR-directed expression of this hybrid DNA could be activated in trans by the HIV tat gene product. This vector was used for transfection of HeLa-T4+ cells, which are permissive to HIV infection, as well as of normal HeLa cells. HIV replication after infection of the CD4-receptor-bearing HeLa-T4+ cells with HIV-1 was found to be strongly reduced when drug-selected cells cotransfected with pU3R-III/2-5AS and a hygromycin B resistance gene…

Expression vector2'-5'-OligoadenylatevirusesTransfectionBiologyBiochemistryVirologyMolecular biologyVirusLong terminal repeatGene productchemistry.chemical_compoundchemistryGeneticsMolecular BiologyHygromycin BSelectable markerBiotechnologyThe FASEB Journal
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Alterations inras-gene expression and intracellular distribution of protein kinase C in the spongeGeodia cydonium in response to marine pollution

1990

The siliceous spongeGeodia cydonium Jameson was used to study the influence of pollution in marine environments on selected parameters of the intracellular signal transduction pathway. The parameters chosen were: intracellular distribution of protein kinase C (PK-C),ras-gene expression and DNA polymerasealpha (DNA Polalpha) activity. Both PK-C andras-gene product (ras-protein) have previously been established to be key molecules in the intracellular signalling pathway in sponges; increased level ofras-protein mediates events following sponge cell-cell contact. Three unpolluted and three polluted sites in the off-shore seawater around Rovinj (Yugoslavia) were selected for the study in 1989. …

chemistry.chemical_classificationEcologybiologyCell growthAquatic Sciencebiology.organism_classificationTransplantationSpongeCytosolEnzymeBiochemistrychemistryGene expressionEcology Evolution Behavior and SystematicsProtein kinase CIntracellularMarine Biology
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Functional characterization of Tat protein from human immunodeficiency virus. Evidence that Tat links viral RNAs to nuclear matrix.

1990

The processes of transcription and posttranscription are assumed to proceed in close association with the nuclear matrix. In this study we demonstrated that Tat, the trans-activating protein from human immunodeficiency virus type 1 (HIV-1), binds both to the TAR region of the nascent HIV mRNAs and the nuclear matrix with high affinity. Both North/Western blotting experiments and nitrocellulose binding studies revealed that Tat binds with an association constant (K alpha) of approximately 1 x 10(9) M-1 to the TAR segment of HIV RNA; binding of Tat to this sequence which is present between position 32 and 82 downstream from the TATA box was also confirmed by gel retardation assays. Binding of…

Messenger RNAViral matrix proteinTranscription GeneticTATA boxBinding proteinGene Products gagCell BiologyBiologyNuclear matrixBiochemistryMolecular biologyCell LineTranscription (biology)Gene Products tatHIV-1Trans-ActivatorsHumansRNA ViralNuclear Matrixtat Gene Products Human Immunodeficiency VirusCloning MolecularBinding siteMolecular BiologyProtein secondary structure
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Evidence for a direct interaction of Rev protein with nuclear envelop mRNA-translocation system.

1991

The interaction of the Rev protein from human immunodeficiency virus type 1 (HIV-1) with the nucleocytoplasmic mRNA-transport system was investigated. In gel-shift assay, the recombinant Rev protein used in this study selectively bound to the Rev-responsive element (RRE) region of HIV-1 env-specific RNA. Nitrocellulose-filter-binding studies and Northern/Western-blotting experiments revealed an association constant of approximately 1 x 10(10) M-1. The Rev protein also strongly bound to isolated nuclear envelopes from H9 cells, containing the poly(A)-binding site (= mRNA carrier) and the nucleoside triphosphatase (= NTPase), which are thought to be involved in nuclear export of poly(A)-rich …

Pore complexPolyadenylationNuclear EnvelopevirusesBlotting WesternBiologyBiochemistryCell LineAdenosine TriphosphateAnimalsRNA MessengerNuclear porePhosphorylationNuclear export signalMessenger RNAVesicleRNABiological Transportrev Gene Products Human Immunodeficiency VirusBlotting NorthernNucleoside-TriphosphataseMolecular biologyPhosphoric Monoester HydrolasesRecombinant ProteinsCell biologyRatsBlotGene Products revHIV-1RNA ViralPoly AEuropean journal of biochemistry
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Binding of Tat Protein to TAR Region of Human Immunodeficiency Virus Type 1 Blocks TAR-Mediated Activation of (2′-5′)Oligoadenylate Synthetase

1990

The TAR sequence of the 5' leader of HIV-1 long terminal repeat-directed mRNA was found to be able to bind to and to activate double-stranded RNA-dependent (2'-5')A synthetase. Binding of TAR to the purified synthetase in vitro was abolished by addition of HIV-1 Tat protein, which binds to this sequence with a high affinity. Inhibition of TAR-mediated activation of (2'-5')A synthetase by Tat was prevented in the presence of the Zn2+ and Cd2+ chelators o-phenanthroline and penicillamine, which did not impair TAR-synthetase interaction. Transient expression assays of bacterial chloramphenicol acetyltransferase (CAT) gene in HeLa cells revealed that the levels of both CAT mRNA and CAT protein …

Chloramphenicol O-AcetyltransferaseGene Expression Regulation ViralImmunologyBiologyTransfectionChloramphenicol acetyltransferaseTar (tobacco residue)InterferonVirology2'5'-Oligoadenylate SynthetasemedicineHumansRNA MessengerGeneRepetitive Sequences Nucleic AcidRegulation of gene expressionMessenger RNA2'-5'-OligoadenylatePenicillamineTransfectionMolecular biologyEnzyme ActivationZincInfectious DiseasesGenes tatHIV-1Trans-ActivatorsInterferonsCadmiumPhenanthrolinesmedicine.drugAIDS Research and Human Retroviruses
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Intracellular signal transduction pathways in sponges.

1990

Abstract Sponges are the lowest multicellular eukaryotic organisms. Due to the relatively low specialization, and concomitantly the high differentiation and dedifferentiation potency of their cells, the sponge cell system has proven to be a useful model to study the mechanism of cell-cell adhesion on molecular levels. Results of detailed biochemical and cell biological studies with the main cell adhesion molecules, the aggregation factor (AF) and the aggregation receptor, led to the formation of the modulation theory of cell adhesion. The events of cell adhesion are contigent on a multiplicity of precisely coordinated intracellular signal transduction pathways. Using the marine sponge Geodi…

DNA synthesisCell adhesion moleculeCellMembrane ProteinsGeneral MedicineBiologyCell biologyPoriferaIntracellular signal transductionchemistry.chemical_compoundMicroscopy Electronmedicine.anatomical_structurechemistryLectinsmedicineCell AdhesionPhosphorylationAnimalsPhosphatidylinositolCell adhesionProtein kinase CProtein Kinase CSignal TransductionElectron microscopy reviews
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Retrovirus infection and aging: Increase in UAG suppressor tRNA expression in aged mice.

1994

Summary The effect of aging on expression of a natural glutamine suppressor tRNA (tRNA Gln(UmUG) ) was studied in different tissues of mice; this tRNA recognizes UAG and inserts glutamine at the site of the termination codon. The level of tRNA Gln(UmUG) was found to be strongly increased in aged mice, compared to newborn and mature animals. An elevated expression of tRNA Gln(UmUG) has also been found in retrovirus-infected cells; in Moloney virus-infected cells the suppressor tRNA allows to read-through the UAG codon within the retroviral protease gene. We suggest that the increase in the level of tRNA Gln(UmUG) may influence retroviral gene expression with age.

chemistry.chemical_classificationAgingHealth (social science)biologybiology.organism_classificationMolecular biologyStop codonlaw.inventionGlutamineRetrovirusEnzymechemistryBiochemistrylawGene expressionTransfer RNASuppressorGeriatrics and GerontologyGerontologyGeneArchives of gerontology and geriatrics
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