Evidence for spatiotemporal shift in demersal fishery management priority areas in the western Mediterranean
14 pages, 10 figures, 2 tables, 1 appendix
Bayesian spatio-temporal approach to identifying fish nurseries by validating persistence areas
Spatial and temporal closures of fish nursery areas to fishing have recently been recognized as useful tools for efficient fisheries management, as they preserve the reproductive potential of populations and increase the recruitment of target species. In order to identify and locate potential nursery areas for spatio-temporal closures, a solid understanding of species− environment relationships is needed, as well as spatial identification of fish nurseries through the application of robust analyses. One way to achieve knowledge of fish nurseries is to analyse the persistence of recruitment hotspots. In this study, we propose the comparison of different spatiotemporal model structures to ass…
Modelling spatially sampled proportion processes
Many ecological processes are measured as proportions and are spatially sampled. In all these cases the standard procedure has long been the transformation of proportional data with the arcsine square root or logit transformation, without considering the spatial correlation in any way. This paper presents a robust regression model to analyse this kind of data using a beta regression and including a spatially correlated term within the Bayesian framework. As a practical example, we apply the proposed approach to a spatio-temporally sampled fishery discard dataset.
A Marine Spatial Planning Approach to Minimize Discards: Challenges and Opportunities of the Landing Obligation in European Waters
A sensible approach to minimize discards is to avoid areas or seasons where unwanted catch may be present. The implementation of a Marine Spatial Planning (MSP) approach to discard management requires the understanding of marine biological processes, as well as fishing conditions at a defined spatial scale. Mathematical models that analyze the spatio-temporal conditions of selected fishing areas allow the definition of different scenarios where discards are minimized by avoiding fishing for unwanted species and/or illegal specimens. Here we show some examples of how particular spatial models can be used for advice on MSP for discards. We introduce a geoserver GIS platform developed to produ…
Identifying the best fishing-suitable areas under the new European discard ban
Abstract The spatial management of fisheries has been repeatedly proposed as a discard mitigation measure. A number of studies have assessed the fishing suitability of an area based on units of by-catch or discard per unit effort. However, correct identification of fishing-suitable areas should assess biomass loss with respect to the benefits. This study therefore, proposes the analysis of by-catch ratios, which do represent benefit vs. loss and are standardized to a wide range of effort characteristics. Furthermore, our study proposes the use of two ratios: the proportion of total unwanted biomass out of the total catch as an indicator of the overall ecological impact, and the proportion o…
Spatio-Temporal Assessment of the European Hake (Merluccius merluccius) Recruits in the Northern Iberian Peninsula
14 pages, 9 figures, 3 tables.-- This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY)
Incorporating Biotic Information in Species Distribution Models: A Coregionalized Approach
In this work, we discuss the use of a methodological approach for modelling spatial relationships among species by means of a Bayesian spatial coregionalized model. Inference and prediction is performed using the integrated nested Laplace approximation methodology to reduce the computational burden. We illustrate the performance of the coregionalized model in species interaction scenarios using both simulated and real data. The simulation demonstrates the better predictive performance of the coregionalized model with respect to the univariate models. The case study focus on the spatial distribution of a prey species, the European anchovy (Engraulis encrasicolus), and one of its predator spe…
Spatio-Temporal model structures with shared components for semi-continuous species distribution modelling
Abstract Understanding the spatio-temporal dynamism and environmental relationships of species is essential for the conservation of natural resources. Many spatio-temporally sampled processes result in continuous positive [ 0 , ∞ ) abundance datasets that have many zero values observed in areas that lie outside their optimum niche. In such cases the most common option is to use two-part or hurdle models, which fit independent models and consequently independent environmental effects to occurrence and conditional-to-presence abundance. This may be correct in some cases, but not as much in others where the detection probability is related to the abundance. The aim of this work is to infer the…
Accounting for preferential sampling in species distribution models
D. C., A. L. Q. and F. M. would like to thank the Ministerio de Educación y Ciencia (Spain) for financial support (jointly financed by the European Regional Development Fund) via Research Grants MTM2013‐42323‐P and MTM2016‐77501‐P, and ACOMP/2015/202 from Generalitat Valenciana (Spain). Species distribution models (SDMs) are now being widely used in ecology for management and conservation purposes across terrestrial, freshwater, and marine realms. The increasing interest in SDMs has drawn the attention of ecologists to spatial models and, in particular, to geostatistical models, which are used to associate observations of species occurrence or abundance with environmental covariates in a fi…
Assessing the spatiotemporal persistence of fish distributions: a case study on two red mullet species (Mullus surmuletus and M. barbatus) in the western Mediterranean
Understanding the spatiotemporal persistence of fish distributions is key to defining fish hotspots and effective fisheries-restricted areas (FRAs). Hierarchical Bayesian spatiotemporal models provide an excellent framework to understand these distributions, as they can accommodate different spatiotemporal behaviour in the data, primarily due to their flexibility. The aim of this research was to characterize the fundamental behavioural patterns of fish as persistent, opportunistic or progressive by comparing different spatiotemporal model structures in order to provide better information for marine spatial planning. To illustrate this method, the spatiotemporal distributions of 2 sympatric …
Occurrence and impact of interactions between small-scale fisheries and predators, with focus on Mediterranean monk seals (Monachus monachus Hermann 1779), around Lipsi Island complex, Aegean Sea, Greece
Abstract Antagonistic interaction between Mediterranean marine mammals, including the endangered monk seal ( Monachus monachus ), and small-scale fisheries is a growing problem in the Aegean Sea. Effective management measures are needed to ensure both the survival of the monk seal population, and its coexistence with the small-scale fisheries. In this study, data from 371 fishing journeys by 8 different boats was collected between March and November 2014. Evidence of depredation by monk seals was recorded in 19.1% of fishing journeys, by cetaceans in 5%, and by other predators in 16.5%. Analysis of landings data showed that gear and depth were the variables most likely to influence the occu…
Species distribution modelling in fisheries science
Latest fisheries directives propose adopting an ecosystem approach to manage fisheries \citep{FAO-EAFM}. Such an approach aims to protect important ecosystems based on the principle that healthy ecosystems produce more and thus enhance sustainability. Unfortunately, quantifying the importance of an ecosystem is a difficult task to do due the immense number of interactions involved in marine systems. This PhD dissertation relies on the fact that good fisheries distribution maps could play a very important role as they allow a visual and intuitive assessment of different marine areas. Unfortunately, the limited amount of data available and the inherent difficulties of modelling fishery data h…