0000000000353227

AUTHOR

Jean M.f. Martins

showing 2 related works from this author

Copper Dynamics and Impact on Microbial Communities in Soils of Variable Organic Status

2008

International audience; The effect of soil organic status on copper impact was investigated by means of a microcosm study carried out on a vineyard soil that had been amended with varying types of organic matter during a previous long-term field experiment. Soil microcosms were contaminated at 250 mg Cu kg−1 and incubated for 35 days. Copper distribution and dynamics were assessed in the solid matrix by a sequential extraction procedure and in the soil solution by measuring total and free exchangeable copper concentrations. Copper bioavailability was also measured with a whole-cell biosensor. Modifications of microbial communities were assessed by means of biomass-C measurements and charact…

[SDE] Environmental SciencesSEQUENTIAL EXTRACTIONRELATION SOL MICROORGANISME[SDV]Life Sciences [q-bio]010501 environmental sciences01 natural sciencesTOXICITY[ SDE ] Environmental SciencesSoilRNA Ribosomal 16SSoil PollutantsAGRICULTURAL SOILSDNA FungalSoil MicrobiologyTriticumComputingMilieux_MISCELLANEOUS2. Zero hungerchemistry.chemical_classificationCopper toxicity04 agricultural and veterinary sciencesCONTAMINATED SOILS6. Clean waterEnvironmental chemistryVINEYARD SOILS[SDE]Environmental SciencesBACTERIAL COMMUNITIESMicrocosmSoil microbiologyDNA BacterialSEWAGE-SLUDGEAmendmentchemistry.chemical_elementGENETIC-STRUCTUREcomplex mixturesmedicineEnvironmental ChemistryOrganic matter0105 earth and related environmental sciencesSTRUCTURE DU GENOMESPACER ANALYSIS FINGERPRINTSGeneral Chemistrymedicine.diseaseCopperBioavailabilitychemistryDENSITYSoil water040103 agronomy & agriculture0401 agriculture forestry and fisheriesCopper
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Fingerprinting and diversity of bacterial copA genes in response to soil types, soil organic status and copper contamination

2007

A molecular fingerprinting assay was developed to assess the diversity of copA genes, one of the genetic determinants involved in bacterial resistance to copper. Consensus primers of the copA genes were deduced from an alignment of sequences from proteobacterial strains. A PCR detection procedure was optimized for bacterial strains and allowed the description of a novel copA genetic determinant in Pseudomonas fluorescens. The copA DNA fingerprinting procedure was optimized for DNA directly extracted from soils differing in their physico-chemical characteristics and in their organic status (SOS). Particular copA genetic structures were obtained for each studied soil and a coinertia analysis …

Genetics0303 health sciencesGenetic diversityEcologybiology030306 microbiologySoil organic matterPseudomonas fluorescensSoil classificationbiology.organism_classificationApplied Microbiology and BiotechnologyMicrobiology03 medical and health sciencesDNA profilingGenetic variationGene clusterSoil microbiology030304 developmental biologyFEMS Microbiology Ecology
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