0000000000388923

AUTHOR

Mahmoud A. A. Ibrahim

showing 5 related works from this author

In silico drug discovery of major metabolites from spices as SARS-CoV-2 main protease inhibitors

2020

Coronavirus Disease 2019 (COVID-19) is an infectious illness caused by Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2), originally identified in Wuhan, China (December 2019) and has since expanded into a pandemic. Here, we investigate metabolites present in several common spices as possible inhibitors of COVID-19. Specifically, 32 compounds isolated from 14 cooking seasonings were examined as inhibitors for SARS-CoV-2 main protease (Mpro), which is required for viral multiplication. Using a drug discovery approach to identify possible antiviral leads, in silico molecular docking studies were performed. Docking calculations revealed a high potency of salvianolic acid A and curcu…

0301 basic medicineCurcuminIn silicomedicine.medical_treatmentPneumonia ViralHealth InformaticsMolecular dynamicsMolecular Dynamics SimulationViral Nonstructural ProteinsArticleSARS-CoV-2 main proteaseBetacoronavirus03 medical and health scienceschemistry.chemical_compoundCaffeic Acids0302 clinical medicineDrug DiscoverymedicineHumansProtease InhibitorsSpicesPandemicsCoronavirus 3C Proteaseschemistry.chemical_classificationNatural productProteaseSARS-CoV-2Secondary metabolitesCOVID-19LopinavirAmino acidComputer Science ApplicationsMolecular Docking SimulationCysteine Endopeptidases030104 developmental biologyEnzymechemistryBiochemistryDocking (molecular)Molecular dockingLactatesCurcuminThermodynamicsCoronavirus Infections030217 neurology & neurosurgerymedicine.drugComputers in Biology and Medicine
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Euphosantianane A–D: Antiproliferative Premyrsinane Diterpenoids from the Endemic Egyptian Plant Euphorbia Sanctae-Catharinae

2018

Euphorbia species are rich in diterpenes. A solvent extraction of Euphorbia sanctae-catharinae, a species indigenous to the Southern Sinai of Egypt, afforded several premyrsinane diterpenoids (1&ndash

Pharmaceutical ScienceTumor cells01 natural sciencesAnalytical ChemistryTDDTF-ECDlcsh:QD241-441tumor anti-proliferative activitylcsh:Organic chemistryDrug DiscoveryPhysical and Theoretical ChemistrySolvent extractionA549 cellEuphorbiabiologyTraditional medicine010405 organic chemistryChemistryOrganic ChemistryEuphorbiaceaeEuphorbiaceaediterpenesEuphorbia sanctae-catharinaebiology.organism_classification0104 chemical sciences010404 medicinal & biomolecular chemistryChemistry (miscellaneous)flavonoidsMolecular Medicine<i>Euphorbia sanctae-catharinae</i>Molecules
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Sarcoehrenbergilides D–F: cytotoxic cembrene diterpenoids from the soft coral Sarcophyton ehrenbergi

2019

A solvent extract of the soft coral Sarcophyton ehrenbergi afforded cembrene diterpenoids, sarcoehrenbergilid D–F (1–3). Chemical structures were established by modern spectroscopic techniques with absolute stereochemistries determined by circular dichroism (CD) and time-dependent density functional theory electronic CD calculations (TDDFT-ECD). Cytotoxicity activities for 1–3 were evaluated against three human cancer cell lines: lung (A549), colon (Caco-2) and liver (HepG2).

Circular dichroismChemistryStereochemistryGeneral Chemical EngineeringCoralSarcophyton ehrenbergi02 engineering and technologyGeneral Chemistry010402 general chemistry021001 nanoscience & nanotechnology01 natural sciences0104 chemical sciencesCytotoxic T cell0210 nano-technologyCytotoxicityHuman cancerRSC Advances
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Two novel oxetane containing lignans and a new megastigmane from Paronychia arabica and in silico analysis of them as prospective SARS-CoV-2 inhibito…

2021

The chemical characterization of the extract of the aerial parts of Paronychia arabica afforded two oxetane containing lignans, paronychiarabicine A (1) and B (2), and one new megastigmane, paronychiarabicastigmane A (3), alongside a known lignan (4), eight known phenolic compounds (5–12), one known elemene sesquiterpene (13) and one steroid glycoside (14). The chemical structures of the isolated compounds were constructed based upon the HRMS, 1D, and 2D-NMR results. The absolute configurations were established via NOESY experiments as well as experimental and TDDFT-calculated electronic circular dichroism (ECD). Utilizing molecular docking, the binding scores and modes of compounds 1–3 tow…

chemistry.chemical_classificationLignanProteasebiology010405 organic chemistryStereochemistryGeneral Chemical Engineeringmedicine.medical_treatmentIn silicoActive siteGeneral ChemistryOxetane01 natural sciences0104 chemical sciencesAmino acid010404 medicinal & biomolecular chemistrychemistry.chemical_compoundchemistryDocking (molecular)RNA polymerasebiology.proteinmedicineRSC Advances
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Kaemgalangol A: Unusual seco-isopimarane diterpenoid from aromatic ginger Kaempferia galanga.

2018

Abstract A new unusual seco-isopimarane, kaemgalangol A (1) and 12 usual analogs (2−13) were isolated from the rhizomes of Kaempferia galanga (Family: Zingiberaceae). KaemgalangolA (1) represented a rarely isolated 9,10-seco-isopimarane skeleton. The chemical structures of the isolated compounds were mainlyinvestigated by spectroscopic techniques such as 1D, 2D NMR, and HRMS. The absolute configuration of 1–3 was studied by X-ray diffraction analysis as well as experimental and TDDFT-calculated electronic circular dichroism. Among the isolated diterpenoids, 5, 6 and 9 exhibited cytotoxic activity against HeLa (IC50 75.1, 74.2 and 76.5 μM, respectively) and HSC-2 (IC50 69.9, 53.3 and 58.2 μM…

Circular dichroismStereochemistry01 natural sciencesHeLaZingiberaceaeDrug DiscoveryKaempferia galangaHumansPharmacologybiologyMolecular Structure010405 organic chemistryChemistryAbsolute configurationGeneral Medicinebiology.organism_classificationAntineoplastic Agents PhytogenicTerpenoid0104 chemical sciencesRhizome010404 medicinal & biomolecular chemistryZingiberaceaeDiterpenesTwo-dimensional nuclear magnetic resonance spectroscopyRhizomeHeLa CellsFitoterapia
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