0000000000395741

AUTHOR

Lars Paulin

showing 2 related works from this author

Related haloarchaeal pleomorphic viruses contain different genome types

2012

Archaeal viruses have been the subject of recent interest due to the diversity discovered in their virion architectures. Recently, a new group of haloarchaeal pleomorphic viruses has been discovered. It is distinctive in terms of the virion morphology and different genome types (ssDNA/dsDNA) harboured by rather closely related representatives. To date there are seven isolated viruses belonging to this group. Most of these share a cluster of five conserved genes, two of which encode major structural proteins. Putative proviruses and proviral remnants containing homologues of the conserved gene cluster were also identified suggesting a long-standing relationship of these viruses with their ho…

Archaeal VirusesGenes ViralviruseseducationMolecular Sequence DataGenomicsGenome ViralBiologyENCODEGenome03 medical and health sciencesViral ProteinsGene clusterGeneticsNucleotide MotifsGene1183 Plant biology microbiology virologyChromatography High Pressure Liquid030304 developmental biologyGenomic organizationGenetics0303 health sciencesBase Sequence030306 microbiologyNucleosidesArchaeal VirusesGenomicsViral replicationvirus haloarchaea genomicsDNA ViralNucleic Acids Research
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Evidence for Natural Horizontal Transfer of the pcpB Gene in the Evolution of Polychlorophenol-Degrading Sphingomonads

2002

ABSTRACT The chlorophenol degradation pathway in Sphingobium chlorophenolicum is initiated by the pcpB gene product, pentachlorophenol-4-monooxygenase. The distribution of the gene was studied in a phylogenetically diverse group of polychlorophenol-degrading bacteria isolated from contaminated groundwater in Kärkölä, Finland. All the sphingomonads isolated were shown to share pcpB gene homologs with 98.9 to 100% sequence identity. The gene product was expressed when the strains were induced by 2,3,4,6-tetrachlorophenol. A comparative analysis of the 16S rDNA and pcpB gene trees suggested that a recent horizontal transfer of the pcpB gene was involved in the evolution of the catabolic pat…

Molecular Sequence Datamedicine.disease_causeSphingomonasApplied Microbiology and BiotechnologyMixed Function OxygenasesGene product03 medical and health sciencesTransduction GeneticRNA Ribosomal 16SmedicineEnvironmental Microbiology and BiodegradationAmino Acid SequenceAlleleGeneEscherichia coli030304 developmental biologySphingobium chlorophenolicumGenetics0303 health sciencesSequence Homology Amino AcidEcologybiology030306 microbiologybiology.organism_classification16S ribosomal RNASphingomonasBiological EvolutionHorizontal gene transferChlorophenolsFood ScienceBiotechnologyApplied and Environmental Microbiology
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