0000000000402344

AUTHOR

Olivier Vallon

showing 2 related works from this author

The Chlamydomonas genome reveals the evolution of key animal and plant functions

2007

Chlamydomonas reinhardtii is a unicellular green alga whose lineage diverged from land plants over 1 billion years ago. It is a model system for studying chloroplast-based photosynthesis, as well as the structure, assembly, and function of eukaryotic flagella (cilia), which were inherited from the common ancestor of plants and animals, but lost in land plants. We sequenced the ∼120-megabase nuclear genome of Chlamydomonas and performed comparative phylogenomic analyses, identifying genes encoding uncharacterized proteins that are likely associated with the function and biogenesis of chloroplasts or eukaryotic flagella. Analyses of the Chlamydomonas genome advance our understanding of the a…

0106 biological sciencesMESH: Sequence Analysis DNAMESH: Algal ProteinsChloroplastsProteomeMESH: PlantsChlamydomonas reinhardtii01 natural sciencesGenomeMESH: Membrane Transport ProteinsDNA AlgalMESH: DNA AlgalMESH: AnimalsGoniumPhotosynthesisMESH: PhylogenyMESH: PhotosynthesisPhylogenyGenetics0303 health sciencesGenomeMultidisciplinarybiologyMESH: Genomicsfood and beveragesGenomicsPlantsBiological EvolutionMESH: Genes[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biomolecules [q-bio.BM]MESH: ProteomeFlagellaMultigene FamilyMESH: Computational BiologyMESH: Chlamydomonas reinhardtiiNuclear geneMolecular Sequence Data[SDV.BC]Life Sciences [q-bio]/Cellular BiologyFlagellumMESH: FlagellaArticle03 medical and health sciencesIntraflagellar transportMESH: EvolutionAnimalsMESH: Genome[SDV.BBM.BC]Life Sciences [q-bio]/Biochemistry Molecular Biology/Biochemistry [q-bio.BM]Gene[SDV.BC] Life Sciences [q-bio]/Cellular Biology030304 developmental biologyMESH: Molecular Sequence DataMESH: ChloroplastsAlgal ProteinsChlamydomonasComputational BiologyMembrane Transport ProteinsSequence Analysis DNAbiology.organism_classificationGenesMESH: Multigene FamilyChlamydomonas reinhardtii010606 plant biology & botany
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The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation

2007

The smallest known eukaryotes, at ≈1-μm diameter, are Ostreococcus tauri and related species of marine phytoplankton. The genome of Ostreococcus lucimarinus has been completed and compared with that of O. tauri . This comparison reveals surprising differences across orthologous chromosomes in the two species from highly syntenic chromosomes in most cases to chromosomes with almost no similarity. Species divergence in these phytoplankton is occurring through multiple mechanisms acting differently on different chromosomes and likely including acquisition of new genes through horizontal gene transfer. We speculate that this latter process may be involved in altering the cell-surface character…

0106 biological sciencesGenome evolutionProtein familyGene Transfer Horizontal[SDV]Life Sciences [q-bio]Molecular Sequence DataBiologyEnvironment01 natural sciencesGenomeChromosomesOstreococcus tauriOstreococcus03 medical and health sciencesChlorophyta[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]SelenoproteinsGeneComputingMilieux_MISCELLANEOUS030304 developmental biologyGeneticsCell Nucleus0303 health sciencesMultidisciplinaryMetal metabolismGenomeVitaminsBiological Sciencesbiology.organism_classificationPlanktonAdaptation PhysiologicalBiological EvolutionEukaryotic CellsMetalsHorizontal gene transfer010606 plant biology & botany
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