0000000000421588

AUTHOR

Emmanuelle Morin

showing 7 related works from this author

Evolutionary transition to the ectomycorrhizal habit in the genomes of a hyperdiverse lineage of mushroom‐forming fungi

2022

International audience; Summary The ectomycorrhizal (ECM) symbiosis has independently evolved from diverse types of saprotrophic ancestors. In this study, we seek to identify genomic signatures of the transition to the ECM habit within the hyper-diverse Russulaceae. We present comparative analyses of the genomic architecture and the total and secreted gene repertoires of 18 species across the order Russulales of which 13 are newly sequenced, including a representative of a saprotrophic member of Russulaceae, Gloeopeniophorella convolvens. The genomes of ECM Russulaceae are characterized by a loss of genes for plant cell-wall degrading enzymes (PCWDEs), an expansion of genome size through in…

Transposable elementPhysiology[SDV]Life Sciences [q-bio]Lineage (evolution)russulaceaePlant SciencerussulalesGenomeEvolution MolecularHabitsMycorrhizaeevolutionary transitionSymbiosisSecondary metabolismGeneGenome sizeComputingMilieux_MISCELLANEOUSPhylogenybiology[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]syntenybiology.organism_classificationEvolutionary biologyDNA Transposable Elementssecondary metabolism clusterRussulaceaetransposable elementsAgaricalesectomycorrhizal habitRussulalesNew Phytologist
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Evolutionary priming and transition to the ectomycorrhizal habit in an iconic lineage of mushroom-forming fungi: is preadaptation a requirement?

2021

AbstractThe ectomycorrhizal symbiosis is an essential guild of many forested ecosystems and has a dynamic evolutionary history across kingdom Fungi, having independently evolved from diverse types of saprotrophic ancestors. In this study, we seek to identify genomic features of the transition to the ectomycorrhizal habit within the Russulaceae, one of the most diverse lineages of ectomycorrhizal fungi. We present comparative analyses of the pangenome and gene repertoires of 21 species across the order Russulales, including a closely related saprotrophic member of Russulaceae. The ectomycorrhizal Russulaceae is inferred to have originated around the Cretaceous-Paleogene extinction event (73.…

food.ingredientfoodSymbiosisbiologyEvolutionary biologyLineage (evolution)Russulaceaebiology.organism_classificationGloeopeniophorellaGenome sizeGenomeRussulalesSynteny
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Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis

2013

International audience; The mutualistic symbiosis involving Glomeromycota, a distinctive phylum of early diverging Fungi, is widely hypothesized to have promoted the evolution of land plants during the middle Paleozoic. These arbuscular mycorrhizal fungi (AMF) perform vital functions in the phosphorus cycle that are fundamental to sustainable crop plant productivity. The unusual biological features of AMF have long fascinated evolutionary biologists. The coenocytic hyphae host a community of hundreds of nuclei and reproduce clonally through large multinucleated spores. It has been suggested that the AMF maintain a stable assemblage of several different genomes during the life cycle, but thi…

0106 biological sciencesRhizophagus irregularismutualism[SDV]Life Sciences [q-bio]Molecular Sequence DataFungus01 natural sciencesGenomecarbohydrate-active enzymes; effector; fungal evolution; glomales; mutualismGlomeromycotaEvolution Molecular03 medical and health sciencesSymbiosisMycorrhizaeBotanyGlomeromycotaSymbiosisGenefungal evolution030304 developmental biologyGenomic organizationMucoromycotina0303 health sciencesMultidisciplinarybiology[ SDV ] Life Sciences [q-bio]Base SequencefungiglomalesSequence Analysis DNA15. Life on landPlantsBiological Sciencesbiology.organism_classificationeffectorEvolutionary biologycarbohydrate-active enzymesGenome Fungal010606 plant biology & botany
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First identification of polymorphic microsatellite markers in the Burgundy truffle, Tuber aestivum (Tuberaceae)

2014

SPEIPMCT2Pour cette revue, la version de l'éditeur est autorisée mais il y a un embargo d'un an (mentionné dans les Conditions générales : "On Institutional Repositories after 12 months").On peut donc mettre la PJ en "publique" mais il faut indiquer une date d'embargo (un an à partir de la date de publication). L'embargo sera levé automatiquement. Laissée lors du dépôt en workflow par prudence.; Premise of the study: Tuber aestivum, the most common truffle in Europe, plays an important role in the commercial truffle market. For the first time, microsatellite primers were developed to investigate polymorphism within this species. • Methods and Results: Using direct shotgun pyrosequencing, 15…

0106 biological sciences[SDV]Life Sciences [q-bio]PopulationtrufflePlant ScienceBiology010603 evolutionary biology01 natural sciencespolymorphismLoss of heterozygosity03 medical and health sciencesTuberaceaeTuber aestivumTuber aestivumlcsh:BotanyTuber uncinatumPolymorphic Microsatellite Markereducationlcsh:QH301-705.5Ecology Evolution Behavior and Systematics030304 developmental biologyGenetics0303 health scienceseducation.field_of_studyTruffle[ SDV ] Life Sciences [q-bio]direct shotgun pyrosequencing;polymorphism;truffle;Tuber aestivum;TuberaceaeTuberaceaebiology.organism_classificationlcsh:QK1-989microsatellites markerspyrosequencinglcsh:Biology (General)PyrosequencingMicrosatellitedirect shotgun pyrosequencingTuber aestivum;Tuber uncinatum;microsatellites markers;pyrosequencing
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The effectors of Corynespora cassiicola virulence in rubber tree. In IRRDB International Rubber

2015

The effectors of Corynespora cassiicola virulence in rubber tree. In IRRDB International Rubber . IRRDB International Rubber Conference

[ SDV.BV ] Life Sciences [q-bio]/Vegetal Biologycorynespora cassiicola[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal Biologyarbre à caoutchouc
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Genetic diversity of Tuber aestivum / uncinatum

2012

SPE IPM CT2 (vu VM)SPEIPMCT2 (vu VM); Tuber aestivum and Tuber uncinatum share a complicated common history from a taxonomic point of view. Indeed, different previous studies have shown contradictory conclusions. For some authors, Tuber aestivum and Tuber uncinatum are a single species and for others, they are two different species. In another study, we used 9 molecular markers: ITS1, ITS2, nuSSU, nuLSU, mtLSU, mtSSU, EF1α, β-tubulin and RPB2. The results show some genetic differences between samples for some of the analyzed sequences. However, no genetic differentiation that would support the separation of two different species was observed. We have concluded that Tuber aestivum and Tuber …

[SDV] Life Sciences [q-bio]microsatellites markerspyrosequencing[ SDV ] Life Sciences [q-bio]Tuber aestivum[SDV]Life Sciences [q-bio]Tuber uncinatumfood and beverages
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Regulatory networks underlying mycorrhizal development delineated by genome-wide expression profiling and functional analysis of the transcription fa…

2017

Background: Ectomycorrhizal (ECM) fungi develop a mutualistic symbiotic interaction with the roots of their host plants. During this process, they undergo a series of developmental transitions from the running hyphae in the rhizosphere to the coenocytic hyphae forming finger-like structures within the root apoplastic space. These transitions, which involve profound, symbiosis-associated metabolic changes, also entail a substantial transcriptome reprogramming with coordinated waves of differentially expressed genes. To date, little is known about the key transcriptional regulators driving these changes, and the aim of the present study was to delineate and functionally characterize the trans…

polypeptidelcsh:QH426-470Transcription factors; symbiosis; secreted proteins; transcriptional activator trap assay; yeast; transcriptome; ectomycorrhiza developmentlcsh:BiotechnologyTranscription Factors/geneticslaccaria bicolorpopulusyeastectomycorrhizasecreted proteinsLaccariadéveloppement biologiquelcsh:TP248.13-248.65MycorrhizaeTranscription factorsgenomicsGene Regulatory Networkstranscriptional activator trap assayLaccaria/geneticsectomycorrhiza developmentGene Expression ProfilingMycorrhizae/geneticsfungiMicrobiology and Parasitologypseudotsuga menziesiisymbiosisMicrobiologie et Parasitologielcsh:Genetics[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyontogenyectomycorhizeTranscription factors;ectomycorrhiza development;secreted proteins;symbiosis;transcriptional activator trap assay;transcriptome;yeastsymbiosetranscriptomefacteur de transcriptionResearch Article
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