0000000000423080

AUTHOR

Antonio Marco

0000-0002-8603-7503

showing 2 related works from this author

Evolutionary and structural analyses of GDAP1, involved in Charcot-Marie-Tooth disease, characterize a novel class of glutathione transferase-related…

2003

Mutations in the Ganglioside-induced differentiation-associated protein-1 (GDAP1) gene cause autosomal recessive Charcot-Marie-Tooth disease type 4A. The protein encoded by GDAP1 shows clear similarity to glutathione transferases (also known as glutathione S-transferases or GSTs). The human genome contains a paralog of GDAP1 called GDAP1L1. Using comparative genomics, we show that orthologs of GDAP1 and GDAP1L1 are found in mammals, birds, amphibians, and fishes. Likely orthologs of those genes in invertebrates and a low but consistent similarity with some plant and eubacterial genes have also been found. We demonstrate that GDAP1 and GDAP1L1 do not belong to any of the known classes of GST…

Protein ConformationMolecular Sequence DataSequence alignmentNerve Tissue ProteinsBiologyEvolution MolecularProtein structurePhylogeneticsCharcot-Marie-Tooth DiseaseDatabases GeneticGeneticsCluster AnalysisHumansAmino Acid SequenceMolecular BiologyPeptide sequenceGeneEcology Evolution Behavior and SystematicsPhylogenyGlutathione TransferaseComparative genomicsGeneticsTransmembrane domainMultigene FamilyHuman genomeSequence AlignmentMolecular biology and evolution
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A general strategy to determine the congruence between a hierarchical and a non-hierarchical classification

2007

This article is available from: http://www.biomedcentral.com/1471-2105/8/442

Saccharomyces cerevisiae ProteinsComputer scienceDecision treecomputer.software_genrelcsh:Computer applications to medicine. Medical informaticsInteractomeBiochemistryPattern Recognition AutomatedMitochondrial ProteinsUser-Computer InterfaceSimilarity (network science)Structural BiologyArtificial IntelligenceSequence Analysis ProteinProtein Interaction MappingCluster AnalysisDatabases Proteinlcsh:QH301-705.5Molecular BiologyOligonucleotide Array Sequence AnalysisApplied MathematicsMethodology ArticleDendrogramDecision TreesReproducibility of ResultsClassificationPartition (database)Computer Science ApplicationsTree (data structure)Rankinglcsh:Biology (General)Pattern recognition (psychology)lcsh:R858-859.7Data miningcomputerBiological networkBMC Bioinformatics
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