Cortex-wide BOLD fMRI activity reflects locally-recorded slow oscillation-associated calcium waves.

When a person is in a deep non-dreaming sleep, neurons in their brain alternate slowly between periods of silence and periods of activity. This gives rise to low-frequency brain rhythms called slow waves, which are thought to help stabilize memories. Slow wave activity can be detected on multiple scales, from the pattern of electrical impulses sent by an individual neuron to the collective activity of the brain’s entire outer layer, the cortex. But does slow wave activity in an individual group of neurons in the cortex affect the activity of the rest of the brain? To find out, Schwalm, Schmid, Wachsmuth et al. took advantage of the fact that slow waves also occur under general anesthesia, a…

A Roadmap to Applying Optogenetics in Neuroscience

Optogenetics allows for the specific manipulation of the activity of genetically defined cell populations in the CNS. Yet, it requires effective gene delivery, light stimulation, and readout strategies. Here, we provide a roadmap aimed at guiding the experimenter in the process of establishing an optogenetic approach tailored to a given research hypothesis in the field of neuroscience.

Assessing sensory versus optogenetic network activation by combining (o)fMRI with optical Ca2+ recordings

Encoding of sensory inputs in the cortex is characterized by sparse neuronal network activation. Optogenetic stimulation has previously been combined with fMRI (ofMRI) to probe functional networks. However, for a quantitative optogenetic probing of sensory-driven sparse network activation, the level of similarity between sensory and optogenetic network activation needs to be explored. Here, we complement ofMRI with optic fiber-based population Ca2+ recordings for a region-specific readout of neuronal spiking activity in rat brain. Comparing Ca2+ responses to the blood oxygenation level-dependent signal upon sensory stimulation with increasing frequencies showed adaptation of Ca2+ transient…

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