0000000000526280

AUTHOR

Robert J Henry

0000-0002-4060-0292

showing 3 related works from this author

Evaluation of chloroplast genome annotation tools and application to analysis of the evolution of coffee species.

2018

International audience; Chloroplast sequences are widely used for phylogenetic analysis due to their high degree of conservation in plants. Whole chloroplast genomes can now be readily obtained for plant species using new sequencing methods, giving invaluable data for plant evolution However new annotation methods are required for the efficient analysis of this data to deliver high quality phylogenetic analyses. In this study, the two main tools for chloroplast genome annotation were compared. More consistent detection and annotation of genes were produced with GeSeq when compared to the currently used Dogma. This suggests that the annotation of most of the previously annotated chloroplast …

0106 biological sciences0301 basic medicineChloroplastsPlant GenomesPlant SciencePlant Genetics01 natural sciencesGenomeCoffeeDatabase and Informatics MethodsPlant GenomicsPlastidsPhylogenyData Management2. Zero hungerPlant evolutionMultidisciplinarybiologyPhylogenetic treeQRfood and beveragesPhylogenetic AnalysisGenome projectGenomicsPhylogenetics[INFO.INFO-MA]Computer Science [cs]/Multiagent Systems [cs.MA]MedicineEngineering and Technology[INFO.INFO-DC]Computer Science [cs]/Distributed Parallel and Cluster Computing [cs.DC]Cellular Structures and OrganellesCellular TypesSequence AnalysisResearch ArticleBiotechnologyComputer and Information SciencesBioinformaticsSciencePlant Cell BiologyBioengineering[INFO.INFO-SE]Computer Science [cs]/Software Engineering [cs.SE]Coffea canephoraGenes PlantResearch and Analysis Methods010603 evolutionary biology[INFO.INFO-IU]Computer Science [cs]/Ubiquitous ComputingEvolution Molecular[INFO.INFO-CR]Computer Science [cs]/Cryptography and Security [cs.CR]03 medical and health sciencesPhylogeneticsChloroplast GenomePlant CellsGeneticsEvolutionary SystematicsGenome ChloroplastTaxonomyEvolutionary BiologyCoffea arabicaCoffeafungiBiology and Life SciencesComputational BiologyMolecular Sequence AnnotationSequence Analysis DNACell Biology15. Life on landbiology.organism_classificationGenome Analysis[INFO.INFO-MO]Computer Science [cs]/Modeling and SimulationGenome Annotation030104 developmental biologyEvolutionary biology[INFO.INFO-ET]Computer Science [cs]/Emerging Technologies [cs.ET]Plant BiotechnologySequence AlignmentPloS one
researchProduct

The defensive secretion of Eurycotis floridana (Dictyoptera, Blattidae, Polyzosteriinae): chemical identification and evidence of an alarm function

1997

0965-1748 doi: DOI: 10.1016/S0965-1748(97)00033-7; The defensive secretion of the cockroach Eurycotis floridana was believed to contain only (E)-2-hexenal. However, we have shown it consists of 40 components, of which 30 were tentatively identified. (E)-2-Hexenal, (E)-2-hexenol and (E)-2-hexenoic acid represented approximately 98% of the organic phase. The other 2% included 10 aldehydes, 10 alcohols, four acids, two lactones and one ether. Four compounds are novel insect exudates: 3-ethoxyhexanal, 3-hydroxyhexanal, [(E)-1-pentenyl]-4-propyl-1,3-dioxane and 3-[(E)-2-hexenoxyl-hexanal. In addition to its well-known allomonal function, we have demonstrated that the defensive secretion also act…

0106 biological sciencesStereochemistryDEFENSEmedia_common.quotation_subjectEtherInsectEurycotisDictyoptera010603 evolutionary biology01 natural sciencesBiochemistryEurycotis floridanaPheromonesExocrine glandschemistry.chemical_compoundBlattidaebiology.animalBotany[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular Biology[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyMolecular BiologyComputingMilieux_MISCELLANEOUSmedia_commonCockroachbiologyBlattidaeDefenceDictyopterabiology.organism_classification3. Good health010602 entomologychemistryInsect ScienceSex pheromonePheromoneAlarm
researchProduct

Quantitative determination of potent flavor compounds in Burgundy Pinot noir wines using a stable isotope dilution assay

1997

A specific experimental procedure suitable for the quantification of four esters recently identified in a wine of Vitis vinifera cv. Pinot Noir, ethyl dihydrocinnamate (A), ethyl cinnamate (B), methyl anthranilate (C), and ethyl anthranilate (D), was developed and applied to 33 Burgundy wines (calculated on three replicates). The method, involving a stable isotope dilution assay, allows the determination of concentrations from 0.05 μg L-1, with a repeatability better than 10%. The mean, maximum, and minimum amounts found for the four esters were as follows (in μg L-1):  (A) 1.6, 3.2, 0.8; (B) 0.8, 1.6, 0.5; (C) 0.2, 0.6, 0.06; (D) 2.4, 4.8, 0.6. Differences between wines, according to their…

OrganolepticIsotope dilution01 natural scienceschemistry.chemical_compound0404 agricultural biotechnology[SDV.IDA]Life Sciences [q-bio]/Food engineeringAromaFlavorComputingMilieux_MISCELLANEOUSWineChromatographybiologyMethyl anthranilateStable isotope ratio010401 analytical chemistryfood and beverages04 agricultural and veterinary sciencesGeneral ChemistryTECHNIQUE DES TRACEURS[SDV.IDA] Life Sciences [q-bio]/Food engineeringbiology.organism_classification040401 food scienceEthyl cinnamate0104 chemical scienceschemistryGeneral Agricultural and Biological Sciences
researchProduct