0000000000546904

AUTHOR

Abdelaziz Heddi

showing 5 related works from this author

The transposable element-rich genome of the cereal pest Sitophilus oryzae

2021

AbstractBackgroundThe rice weevil Sitophilus oryzae is one of the most important agricultural pests, causing extensive damage to cereal in fields and to stored grains. S. oryzae has an intracellular symbiotic relationship (endosymbiosis) with the Gram-negative bacterium Sodalis pierantonius and is a valuable model to decipher host-symbiont molecular interactions.ResultsWe sequenced the Sitophilus oryzae genome using a combination of short and long reads to produce the best assembly for a Curculionidae species to date. We show that S. oryzae has undergone successive bursts of transposable element (TE) amplification, representing 72% of the genome. In addition, we show that many TE families a…

2. Zero hungerGeneticsTransposable element0303 health sciencesSodalisfood.ingredientEndosymbiosisbusiness.industrySitophilusPest controlfood and beveragesBiologybiology.organism_classificationGenome03 medical and health sciences0302 clinical medicineRice weevilfoodPEST analysisbusiness030217 neurology & neurosurgery030304 developmental biology
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How Does Tremblaya princeps Get Essential Proteins from Its Nested Partner Moranella endobia in the Mealybug Planoccocus citri?

2013

International audience; Many insects maintain intracellular mutualistic symbiosis with a wide range of bacteria which are considered essential for their survival (primary or P-endosymbiont) and typically suffer drastic genome degradation. Progressive loss of P-endosymbiont metabolic capabilities could lead to the recruitment of co-existent facultative endosymbiont (secondary or S-endosymbiont), thus adding more complexity to the symbiotic system. Planococcus citri, among other mealybug species, harbors an unconventional nested endosymbiotic system where every Tremblaya princeps cell (beta-proteobacterium) harbors many Moranella endobia cells (gamma-proteobacterium). In this system, T. princ…

DNA Bacterial[SDV]Life Sciences [q-bio]Planococcus Insectlcsh:MedicineGenomeBacterial genetics03 medical and health sciencesBacterial ProteinsGenome SizeSymbiosisPlanococcus citriAnimalsSymbiosislcsh:ScienceGenome size030304 developmental biologyGenetics0303 health sciencesMultidisciplinarybiology030306 microbiologyHost (biology)lcsh:RBetaproteobacteriaMolecular Sequence AnnotationProkaryoteGene Expression Regulation BacterialSequence Analysis DNAbiology.organism_classificationProtein TransportEssential genelcsh:QGammaproteobacteriaGenome BacterialResearch ArticlePLoS ONE
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Identification of the Weevil immune genes and their expression in the bacteriome tissue

2008

Abstract Background Persistent infections with mutualistic intracellular bacteria (endosymbionts) are well represented in insects and are considered to be a driving force in evolution. However, while pathogenic relationships have been well studied over the last decades very little is known about the recognition of the endosymbionts by the host immune system and the mechanism that limits their infection to the bacteria-bearing host tissue (the bacteriome). Results To study bacteriome immune specificity, we first identified immune-relevant genes of the weevil Sitophilus zeamais by using suppressive subtractive hybridization (SSH) and then analyzed their full-length coding sequences obtained b…

PhysiologyPlant Scienceprotéines et peptides de signalisation intracellulaireStructural BiologyGene expressionlcsh:QH301-705.5Genetics0303 health sciencesAgricultural and Biological Sciences(all)EndosymbiosisReverse Transcriptase Polymerase Chain ReactionMicrobiology and ParasitologyIntracellular Signaling Peptides and ProteinsMicrobiologie et ParasitologielarveLarva1-1-1 Article périodique à comité de lectureInsect ProteinsGeneral Agricultural and Biological SciencesResearch ArticleBiotechnologyexpression géniquecharanconMolecular Sequence DatamuramidaseBiologyGeneral Biochemistry Genetics and Molecular BiologyMicrobiology03 medical and health sciencesAposymbioticcurculionidaeImmune systemEscherichia coliAnimalsGeneEcology Evolution Behavior and SystematicsAlphaproteobacteria030304 developmental biologyBiochemistry Genetics and Molecular Biology(all)030306 microbiologyTOLLIPIntracellular parasitefungiBacteriomeCell Biologybiochemical phenomena metabolism and nutritionGene Expression Regulationlcsh:Biology (General)WeevilsbacteriaCarrier ProteinsAntimicrobial Cationic Peptides[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/SymbiosisDevelopmental BiologyBMC Biology
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Genome degeneration and adaptation in a nascent stage of symbiosis

2014

Symbiotic associations between animals and microbes are ubiquitous in nature, with an estimated 15% of all insect species harboring intracellular bacterial symbionts. Most bacterial symbionts share many genomic features including small genomes, nucleotide composition bias, high coding density, and a paucity of mobile DNA, consistent with long-term host association. In this study, we focus on the early stages of genome degeneration in a recently derived insect-bacterial mutualistic intracellular association. We present the complete genome sequence and annotation of Sitophilus oryzae primary endosymbiont (SOPE). We also present the finished genome sequence and annotation of strain HS, a close…

pseudogènePseudogene[SDV]Life Sciences [q-bio]Molecular Sequence DataIS elements;comparative genomics;degenerative genome evolution;pseudogenes;recent symbiontpseudogenesBacterial genome sizedegenerative genome evolutioncomparative genomicsBiologyGenomeIS elementsEvolution Molecular03 medical and health sciencesEnterobacteriaceaeGeneticsAnimalsdonnée de séquence moléculaireInsertion sequenceSymbiosisGeneEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUS030304 developmental biology2. Zero hungerGeneticsComparative genomicsWhole genome sequencing0303 health sciencesBase Sequence030306 microbiologygénomique comparativeAdaptation PhysiologicalColeopterarecent symbiontAdaptationsymbiosedégradation du génomeGenome Bacterialséquence d'insertionResearch Article
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Coexistence of Wolbachia with Buchnera aphidicola and a Secondary Symbiont in the Aphid Cinara cedri

2004

ABSTRACT Intracellular symbiosis is very common in the insect world. For the aphid Cinara cedri , we have identified by electron microscopy three symbiotic bacteria that can be characterized by their different sizes, morphologies, and electrodensities. PCR amplification and sequencing of the 16S ribosomal DNA (rDNA) genes showed that, in addition to harboring Buchnera aphidicola , the primary endosymbiont of aphids, C. cedri harbors a secondary symbiont (S symbiont) that was previously found to be associated with aphids (PASS, or R type) and an α-proteobacterium that belongs to the Wolbachia genus. Using in situ hybridization with specific bacterial probes designed for symbiont 16S rDNA seq…

Genetics and Molecular BiologyBacterial genome sizeBiologyDNA RibosomalPolymerase Chain ReactionMicrobiologyBuchneraRNA Ribosomal 16SBotanyAnimalsSymbiosisMolecular BiologyRibosomal DNAPhylogenyGeneticsAphidBacteriocytefungifood and beveragesbiochemical phenomena metabolism and nutritionbiology.organism_classificationMicroscopy ElectronAphidsCinarabacteriaWolbachiaBuchneraWolbachiaSymbiotic bacteriaJournal of Bacteriology
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