0000000000553424
AUTHOR
Antonio Biasi
MOLECULAR ANALYSIS OF PHYTOPHTHORA DIVERSITY IN ORNAMENTAL NURSERIES.
A molecular approach based on the use of genus-specific nested-PCR primers (Scibetta et al., 2012; J. Microbiol. Meth. 88: 356-368) was utilized to detect Phytophthora species in soil and root samples of potted ornamentals, collected across Apulia and Calabria, Southern Italy. Analyzed samples comprised many plant species with different levels of symptoms of decline on the canopy and root rots. Extraction protocols were optimized to obtain DNA samples of appropriate quality from soil and roots. The analysis of sequences after cloning of nested-PCR amplicons enabled the identification of different Phytophthora species including P. nicotianae, P. cinnamomi, P. cryptogea, P. palmivora and P. n…
Microsatellite analysis of the population structure in Phytophthora nicotianae
Nine validated SSRs were designed and used to characterize 268 isolates from a broad range of hosts and geographic localities. A total of 129 multilocus genotypes (MLG) were identified with markers showing polymorphisms ranging from 4 (locus P2039) to 24 alleles (locus 1509). Analyses revealed a preferential clonal reproduction in field orchards while sexual reproduction seemed to be more diffused in nurseries. A strong association between genetic groups and host of recovery was revealed for most isolates although this association was less evident for isolates from nurseries. In contrast, a significant geographical structuring was recovered only for isolates from tobacco (sourced in Austral…