0000000000710063

AUTHOR

Mart Krupovic

showing 7 related works from this author

ICTV Virus Taxonomy Profile: Metaviridae

2020

Metaviridae is a family of retrotransposons and reverse-transcribing viruses with long terminal repeats belonging to the order Ortervirales. Members of the genera Errantivirus and Metavirus include, respectively, Saccharomyces cerevisiae Ty3 virus and its Gypsy-like relatives in drosophilids. This is a summary of the International Committee on Taxonomy of Viruses (ICTV) Report on the family Metaviridae, which is available at ictv.global/report/metaviridae.

0301 basic medicineGenes ViralRetroelements030106 microbiologyeducationRetrotransposonInsect VirusesGenome ViralSaccharomyces cerevisiaeBiologyFungal VirusesVirus ReplicationVirus03 medical and health sciencesICTVVirologyRetrovirusesAnimalsRNA VirusesErrantivirusMetaviridaeVirus classificationGeneticsMetaviridaeAnimalretrotransposonVirionfood and beveragesbiology.organism_classificationVirologyLong terminal repeat3. Good health030104 developmental biologytaxononmy[SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/VirologyTaxonomy (biology)DrosophilaIctv Virus Taxonomy ProfileThe Journal of General Virology
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ICTV Virus Taxonomy Profile: Pseudoviridae

2021

Pseudoviridae is a family of reverse-transcribing viruses with long terminal repeats (LTRs) belonging to the order Ortervirales. Pseudoviruses are commonly found integrated in the genomes of diverse plants, fungi and animals and are broadly known as Ty1/Copia LTR retrotransposons. Inside the cell, they form icosahedral virus particles, but unlike most other viruses, do not have an extracellular phase. This is a summary of the ICTV Report on the family Pseudoviridae, which is available at ictv.global/report/pseudoviridae.

0301 basic medicineINTRetroelementstaxonomy. Abbreviations: CPvirusesLTR030106 microbiologynucleocapsidRetrotransposonGenome ViralVirus Replicationvirus-like particlesGenomeVirusPRRTPPT03 medical and health sciencestaxonomyVirologyVLPRetrovirusesreverse transcriptaseICTV ReportcapsidRNA VirusesPBSVirus classificationbiologyAnimalfungiTerminal Repeat SequencesPseudoviridaeproteasepolypurine tractbiology.organism_classificationVirologyLong terminal repeatlong terminal repeat030104 developmental biology[SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/VirologyRNA ViralintegraseRHNCIctv Virus Taxonomy Profileribonuclease HPseudoviridaeprimer binding site
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Bacterial Viruses Subcommittee and Archaeal Viruses Subcommittee of the ICTV: Update of taxonomy changes in 2021

2021

In this article, we – the Bacterial Viruses Subcommittee and the Archaeal Viruses Subcommittee of the International Committee on Taxonomy of Viruses (ICTV) – summarise the results of our activities for the period March 2020 – March 2021. We report the division of the former Bacterial and Archaeal Viruses Subcommittee in two separate Subcommittees, welcome new members, a new Subcommittee Chair and Vice Chair, and give an overview of the new taxa that were proposed in 2020, approved by the Executive Committee and ratified by vote in 2021. In particular, a new realm, three orders, 15 families, 31 subfamilies, 734 genera and 1845 species were newly created or redefined (moved/promoted). Supplem…

Archaeal VirusesSocieties ScientificviruksetLibrary scienceBiologybakteriofagitExecutive committee03 medical and health sciencesVirology Division NewsVirologyvirusesBacteriophages030304 developmental biologyTaxonomy11832 Microbiology and virology0303 health sciencesScience & TechnologyBacteria030306 microbiologysystematiikka (biologia)Archaeal VirusesGeneral MedicineArchaeaVirologyvirologia[SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/VirologyTaxonomy (biology)Bacterial virusLife Sciences & Biomedicine
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Reverse-transcribing viruses (Belpaoviridae, Metaviridae, and Pseudoviridae)

2021

Fourth Edition.

0303 health sciencesbiologyRetrotransposonPseudoviridaebiology.organism_classificationLong terminal repeat3. Good health03 medical and health sciences0302 clinical medicineOrder (biology)RetrovirusEvolutionary biology030220 oncology & carcinogenesisComputingMethodologies_DOCUMENTANDTEXTPROCESSINGCaulimoviridaeMetaviridaeGeneGeneralLiterature_REFERENCE(e.g.dictionariesencyclopediasglossaries)030304 developmental biology
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Genetics for Pseudoalteromonas provides tools to manipulate marine bacterial virus PM2

2008

ABSTRACT The genetic manipulation of marine double-stranded DNA (dsDNA) bacteriophage PM2 ( Corticoviridae ) has been limited so far. The isolation of an autonomously replicating DNA element of Pseudoalteromonas haloplanktis TAC125 and construction of a shuttle vector replicating in both Escherichia coli and Pseudoalteromonas enabled us to design a set of conjugative shuttle plasmids encoding tRNA suppressors for amber mutations. Using a host strain carrying a suppressor plasmid allows the introduction and analysis of nonsense mutations in PM2. Here, we describe the isolation and characterization of a suppressor-sensitive PM2 sus2 mutant deficient in the structural protein P10. To infect an…

MESH: Corticoviridae[SDV]Life Sciences [q-bio]Bacteriophages Transposons and PlasmidsMutantPlasmidPseudoalteromonasRNA TransferMESH: Genetic VectorsMESH: Models GeneticMESH: Capsid ProteinsGenetics0303 health sciencesbiologyMESH: Escherichia coliPseudoalteromonasMESH: Mutagenesis Site-DirectedPhenotypeMESH: DNA CircularElectrophoresis Polyacrylamide GelDNA CircularMESH: Genome ViralPlasmidsMESH: MutationGenetic VectorsGenome ViralMESH: PhenotypeMicrobiologyPseudoalteromonas haloplanktisViral Proteins03 medical and health sciencesShuttle vectorMESH: PlasmidsHost outer membraneEscherichia coliSeawaterMolecular Biology030304 developmental biologyModels Genetic030306 microbiologyMESH: PseudoalteromonasCorticoviridaeMESH: SeawaterViral membranebiology.organism_classificationMESH: RNA TransferMESH: Viral Proteins[SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/BacteriologyMutationMutagenesis Site-DirectedCapsid ProteinsBacterial virusMESH: Electrophoresis Polyacrylamide Gel
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ICTV Virus Taxonomy Profile: Belpaoviridae 2021

2021

The family Belpaoviridae comprises metazoan-infecting reverse-transcribing viruses with long terminal repeats, commonly known as Bel/Pao LTR retrotransposons. These viruses share evolutionary history and genes involved in genome replication and virion formation with reverse-transcribing viruses of the families Metaviridae, Pseudoviridae, Retroviridae and Caulimoviridae. These five families form the order Ortervirales. This is a summary of the ICTV Report on the family Belpaoviridae, which is available at ictv.global/report/belpaoviridae.

0303 health sciencesbiology030302 biochemistry & molecular biologyRetrotransposonPseudoviridaebiology.organism_classificationVirologyGenomeLong terminal repeat3. Good health03 medical and health sciencesVirologyCaulimoviridaeMetaviridaeGeneVirus classification030304 developmental biologyJournal of General Virology
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Ortervirales: New Virus Order Unifying Five Families of Reverse-Transcribing Viruses

2018

International audience; Reverse-transcribing viruses, which synthesize a copy of genomic DNA from an RNA template, are widespread in animals, plants, algae, and fungi (1, 2). This broad distribution suggests the ancient origin(s) of these viruses, possibly [...]

0301 basic medicineS1retrovirusesviruses[SDV]Life Sciences [q-bio]ImmunologyretroviridaeMESH: Reverse TranscriptionL73 - Maladies des animauxVirus Replication[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomyMicrobiologyVirusbelpaoviridaeMESH: Viruses03 medical and health sciencesVirologyinternational committee on taxonomy of viruses (ICTV)Metaviridaevirus classificationLetter to the EditorVirus classificationGeneticsTy3/Gypsy and Ty1/Copia LTR retrotransposonscaulimoviridaevirus evolutionbiologyfungiMESH: Virus ReplicationRNAPseudoviridaeReverse Transcriptionbiology.organism_classificationMESH: Caulimoviridaegenomic DNA030104 developmental biologyMESH: RetroviridaeMESH: HepadnaviridaeInsect ScienceViral evolutionhepadnaviridaeBelpaoviridae; Caulimoviridae; Hepadnaviridae; International Committee on Taxonomy of Viruses (ICTV); Metaviridae; Pseudoviridae; Retroviridae; Ty3/Gypsy and Ty1/Copia LTR retrotransposons; retroviruses; virus classification; virus evolutionViruses[SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/VirologymetaviridaeCaulimoviridaepseudoviridae
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