0000000000711120

AUTHOR

Gerrit Best

showing 2 related works from this author

Single molecule localization microscopy of the distribution of chromatin using Hoechst and DAPI fluorescent probes.

2014

Several approaches have been described to fluorescently label and image DNA and chromatin in situ on the single-molecule level. These superresolution microscopy techniques are based on detecting optically isolated, fluorescently tagged anti-histone antibodies, fluorescently labeled DNA precursor analogs, or fluorescent dyes bound to DNA. Presently they suffer from various drawbacks such as low labeling efficiency or interference with DNA structure. In this report, we demonstrate that DNA minor groove binding dyes, such as Hoechst 33258, Hoechst 33342, and DAPI, can be effectively employed in single molecule localization microscopy (SMLM) with high optical and structural resolution. Upon ill…

DNA ReplicationHoechstDNA RepairDNA repairBiologyfluorescence microscopyDAPIchemistry.chemical_compoundphotoconversionsuper-resolution microscopylocalization microscopyFluorescence microscopeSPDMAnimalsHumansDAPIdSTORMSMLMFluorescent DyesMicroscopySuper-resolution microscopynucleusDNA replicationdSTORCell BiologyDNADNA Minor Groove BindingChromatinChromatinCell biologychemistryMicroscopy FluorescencechromatinblinkingDNAResearch PaperNucleus (Austin, Tex.)
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Quantitative super-resolution localization microscopy of DNA in situ using Vybrant® DyeCycle™ Violet fluorescent probe.

2016

Single Molecule Localization Microscopy (SMLM) is a recently emerged optical imaging method that was shown to achieve a resolution in the order of tens of nanometers in intact cells. Novel high resolution imaging methods might be crucial for understanding of how the chromatin, a complex of DNA and proteins, is arranged in the eukaryotic cell nucleus. Such an approach utilizing switching of a fluorescent, DNA-binding dye Vybrant® DyeCycle™ Violet has been previously demonstrated by us (Żurek-Biesiada et al., 2015) [1]. Here we provide quantitative information on the influence of the chemical environment on the behavior of the dye, discuss the variability in the DNA-associated signal density,…

0301 basic medicineIn situMaterials sciencevybrant violetLocalization microscopyNanotechnologysuper-resolutionlcsh:Computer applications to medicine. Medical informaticsFluorescenceNucleus03 medical and health scienceschemistry.chemical_compound0302 clinical medicineMicroscopylocalization microscopySingle moleculesmedicinedSTORMlcsh:Science (General)Data ArticleMultidisciplinarySuper-ResolutionResolution (electron density)nucleusVybrant violetDNA dyeDNAFluorescenceSuperresolutionChromatinChromatin030104 developmental biologymedicine.anatomical_structurechemistry030220 oncology & carcinogenesischromatinlcsh:R858-859.7fluorescencesingle moleculesNucleusDNAlcsh:Q1-390Data in brief
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