0000000000874491
AUTHOR
Eeva Eronen-rasimus
Additional file 2 of In-depth characterization of denitrifier communities across different soil ecosystems in the tundra
Additional file 2. Fig. S1. Physicochemical composition of tundra soils in Kilpisjärvi, northern Finland. Fig. S2. The microbial diversity of Kilpisjärvi soils as seen using a gene-centric approach. Fig. S3. Genome-resolved metagenomics of tundra soils. Fig. S4. Overview of the microbial diversity in Kilpisjärvi soils based on a genome-resolved approach. Fig. S5. Metabolic potential for denitrification in Stordalen Mire soils. Fig. S6. Phylogeny of a) nirK, b) nirS, c) norB, and d) nosZ sequences from metagenome-assembled genomes (MAGs) recovered from tundra soils in Kilpisjärvi, northern Finland.
In-depth characterization of denitrifier communities across different soil ecosystems in the tundra
Abstract Background In contrast to earlier assumptions, there is now mounting evidence for the role of tundra soils as important sources of the greenhouse gas nitrous oxide (N2O). However, the microorganisms involved in the cycling of N2O in this system remain largely uncharacterized. Since tundra soils are variable sources and sinks of N2O, we aimed at investigating differences in community structure across different soil ecosystems in the tundra. Results We analysed 1.4 Tb of metagenomic data from soils in northern Finland covering a range of ecosystems from dry upland soils to water-logged fens and obtained 796 manually binned and curated metagenome-assembled genomes (MAGs). We then sear…
Additional file 1 of In-depth characterization of denitrifier communities across different soil ecosystems in the tundra
Additional file 1. Table S1. Physicochemical information, sequencing statistics, and accession numbers for 69 soil metagenomes from Kilpisjärvi, northern Finland. Table S2. Information on 796 metagenome-assembled genomes (MAGs) recovered from tundra soils in Kilpisjärvi, northern Finland.