0000000000902581
AUTHOR
Karina Martinez-mayorga
QuBiLS-MAS, open source multi-platform software for atom- and bond-based topological (2D) and chiral (2.5D) algebraic molecular descriptors computations.
Background In previous reports, Marrero-Ponce et al. proposed algebraic formalisms for characterizing topological (2D) and chiral (2.5D) molecular features through atom- and bond-based ToMoCoMD-CARDD (acronym for Topological Molecular Computational Design-Computer Aided Rational Drug Design) molecular descriptors. These MDs codify molecular information based on the bilinear, quadratic and linear algebraic forms and the graph-theoretical electronic-density and edge-adjacency matrices in order to consider atom- and bond-based relations, respectively. These MDs have been successfully applied in the screening of chemical compounds of different therapeutic applications ranging from antimalarials…
MOESM1 of QuBiLS-MAS, open source multi-platform software for atom- and bond-based topological (2D) and chiral (2.5D) algebraic molecular descriptors computations
Additional file 1. The mathematical definitions of the norms, means and statistical invariants as generalizations of the linear combination of LOVIs as global (and/or local) MDs aggregation operator, as well as classical algorithms which generalize the first three groups are presented as Figure SI1-Table S12. The UML diagram (Figure SI3), a debug report file content (Figure SI4), a batch process manager dialog window (Figure SI5) are also listed. Some results of the factor analysis by the principal component method are shown as Table SI6-Table SI8, and finally, the names of structures for Cramer’s steroid database and their corresponding values for the binding affinity to the corticosteroid…