0000000001005391

AUTHOR

Pietro Alifano

showing 5 related works from this author

The mitochondrial genome of Schizosaccharomyces pombe. Stimulation of intra-chromosomal recombination in Escherichia coli by the gene product of the …

1991

The open reading frame of the first intron of the mitochondrial cox1 gene (cox1I1) was expressed in Escherichia coli. The putative intron-encoded protein stimulated the formation of intra-chromosomal lac +-recombinants about threefold. No stimulation was found when the reading frame was inserted in the opposite direction, or when it was interrupted by a deletion. The intronic open reading frame did not complement recA − or recB − mutants of E. coli. In S. pombe, elimination of this intron did not abolish homologous recombination in mitochondria. A possible role of the recombinase activity in yeast mitochondria will be discussed.

RNA SplicingGenes FungalMolecular Sequence DataSaccharomyces cerevisiaeBiologymedicine.disease_causeDNA MitochondrialElectron Transport Complex IVFungal ProteinsRecombinasesOpen Reading FramesSequence Homology Nucleic AcidEndoribonucleasesSchizosaccharomycesGeneticsmedicineRecombinaseEscherichia coliAmino Acid SequenceDNA FungalEscherichia coliRecBCDRecombination GeneticRecombinase activityBase SequenceIntegrasesIntronGeneral Medicinebiology.organism_classificationMolecular biologyNucleotidyltransferasesIntronsOpen reading frameSchizosaccharomyces pombeDNA NucleotidyltransferasesbacteriaHomologous recombination
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Pirin: A novel redox-sensitive modulator of primary and secondary metabolism in Streptomyces

2018

Pirins are evolutionarily conserved iron-containing proteins that are found in all kingdoms of life, and have been implicated in diverse molecular processes, mostly associated with cellular stress. In the present study, we started from the evidence that the insertional inactivation of pirin-like gene SAM23877_RS18305 (pirA) by Phi C31 Att/Int system-based vectors in spiramycin-producing strain Streptomyces ambofaciens ATCC 23877 resulted in marked effects on central carbon and energy metabolism gene expression, high sensitivity to oxidative injury and repression of polyketide antibiotic production. By using integrated transcriptomic, proteomic and metabolite profiling, together with genetic…

0301 basic medicineIn silico030106 microbiologyBioengineeringStreptomycesApplied Microbiology and Biotechnology03 medical and health sciencesPolyketideBacterial ProteinsIron-Binding ProteinsGene expressionActinomycetes; Antibiotics; Beta-oxidation of fatty acids; Pirin; Secondary metabolismSecondary metabolismGenePsychological repressionbiologyChemistryActinomyceteAntibioticbiology.organism_classificationStreptomycesComplementation030104 developmental biologyMetabolic EngineeringBiochemistryPirinPolyketidesSecondary metabolismOxidation-ReductionBeta-oxidation of fatty acidBiotechnology
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Guanosine 5′-diphosphate 3′-diphosphate (ppGpp) as a negative modulator of polynucleotide phosphorylase activity in a ‘rare’ actinomycete

2010

With the beginning of the idiophase the highly phosphorylated guanylic nucleotides guanosine 5'-diphosphate 3'-diphosphate (ppGpp) and guanosine 5'-triphosphate 3'-diphosphate (pppGpp), collectively referred to as (p)ppGpp, activate stress survival adaptation programmes and trigger secondary metabolism in actinomycetes. The major target of (p)ppGpp is the RNA polymerase, where it binds altering the enzyme activity. In this study analysis of the polynucleotide phosphorylase (PNPase)-encoding gene pnp mRNA, in Nonomuraea sp. ATCC 39727 wild-type, constitutively stringent and relaxed strains, led us to hypothesize that in actinomycetes (p)ppGpp may modulate gene expression at the level of RNA …

biologyGuanosinePurine nucleoside phosphorylaseRNAMicrobiologyMolecular biologyGuanosine Tetraphosphatechemistry.chemical_compoundchemistryBiochemistryPolynucleotideRNA polymerasebiology.proteinbacteriaheterocyclic compoundsPolynucleotide phosphorylaseMolecular BiologyPolymeraseMolecular Microbiology
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The Mu1 transposable element of maize contains two promoter signals recognized by the Escherichia coli RNA polymerase.

1990

The galactokinase (GalK) expression plasmid vector system pKO-1 has been used to screen for promoter elements in the maize transposable element Mu1 that function in Escherichia coli. Two transcriptional start points, named S1 and S2, were identified, which are located in the two direct repeats of the transposable element. This paper demonstrates that sequence elements exist in a plant transposable element which function as prokaryotic promotors.

Transposable elementTranscription GeneticMolecular Sequence DataRestriction MappingBiologymedicine.disease_causeZea mayschemistry.chemical_compoundRNA polymeraseGeneticsmedicineEscherichia coliDirect repeatInsertion sequenceCloning MolecularPromoter Regions GeneticMolecular BiologyEscherichia coliGeneticsExpression vectorBase SequencePromoterDNA-Directed RNA PolymerasesGalactokinasechemistryDNA Transposable ElementsMoleculargeneral genetics : MGG
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Guanosine 5'-diphosphate 3'-diphosphate (ppGpp) as a negative modulator of polynucleotide phosphorylase activity in a 'rare' actinomycete.

2010

Abstract With the beginning of the idiophase the highly phosphorylated guanylic nucleotides guanosine 5'-diphosphate 3'-diphosphate (ppGpp) and guanosine 5'-triphosphate 3'-diphosphate (pppGpp), collectively referred to as (p)ppGpp, activate stress survival adaptation programmes and trigger secondary metabolism in actinomycetes. The major target of (p)ppGpp is the RNA polymerase, where it binds altering the enzyme activity. In this study analysis of the polynucleotide phosphorylase (PNPase)-encoding gene pnp mRNA, in Nonomuraea sp. ATCC 39727 wild-type, constitutively stringent and relaxed strains, led us to hypothesize that in actinomycetes (p)ppGpp may modulate gene expression at the leve…

ppGppPolynucleotide phosphorylaseActinomyceteppGpp Actinomycetes
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