0000000001019239

AUTHOR

Francisco R. Tortonda

showing 4 related works from this author

A theoretical study of solvent effects on the conformational equilibria of neutral glycine in aqueous solution

2003

Abstract In this work conformational equilibrium of neutral glycine in solution is systematically investigated by using DFT and MP2 methods combined with solvent continuum models. A systematic exploration of the potential energy surface and full geometry optimizations for several conformers have been carried out in the gas phase and aqueous solution at the MP2/6-31+G** and B3LYP/6-31+G** levels. Zero-point and thermal contributions to the free energy have been obtained at the B3LYP level. Both theoretical levels lead to very similar results, in geometrical and energetic terms, both in the gas phase and in solution. Solvent effects play an important role on the conformational equilibria of n…

Quantitative Biology::BiomoleculesAqueous solutionChemistryCondensed Matter PhysicsBiochemistryTautomerSolventEnergy minimumComputational chemistryPotential energy surfaceThermalPhysics::Atomic and Molecular ClustersPhysics::Chemical PhysicsPhysical and Theoretical ChemistrySolvent effectsConformational isomerismJournal of Molecular Structure: THEOCHEM
researchProduct

Intramolecular proton transfer of serine in aqueous solution. Mechanism and energetics

2000

Serine amino acid in aqueous solution is theoretically studied at the B3PW91/6-31+G** level using a dielectric continuum solvent model. Neutral and zwitterionic structures in the gas phase and in solution are described and the proton-transfer mechanism is discussed. A neutral conformation in which the carboxyl hydrogen atom is already oriented toward the amino group seems to be the absolute energy minimum in the gas phase and the most stable neutral form in solution. The absolute energy minimum in solution is a zwitterionic form. The energy barrier for proton transfer is predicted to be very small, in particular when zero-point-energy contributions are added. Our calculations allow the dyna…

SolventSerineQuantitative Biology::BiomoleculesAqueous solutionChemistryComputational chemistryIntramolecular forceIonizationNon-equilibrium thermodynamicsHydrogen atomDielectricPhysical and Theoretical ChemistryTheoretical Chemistry Accounts: Theory, Computation, and Modeling (Theoretica Chimica Acta)
researchProduct

Correlation effects in proton transfer reactions in solution

1996

Abstract The effects of correlation energy on proton transfer reactions in solution for [H 2 OHOH 2 ] + and [NH 3 HH 2 O] + systems have been studied. Solvent effects have been represented by means of a continuum model. The proton transfer energy profiles for fixed proton donor-proton acceptor distances have been obtained in the gas phase and in solution, both at the HF/6-311G ∗∗ and MP2/6-311G ∗∗ //HF levels of theory. Differences between the correlation energies calculated in the gas phase and in solution are negligible, showing that solvent effects can be correctly described for these proton transfer processes at the HF level.

ProtonChemistryEnergy transferContinuum (design consultancy)Condensed Matter PhysicsBiochemistryAcceptorGas phaseTransfer (group theory)Physical chemistryPhysical and Theoretical ChemistrySolvent effectsAtomic physicsNuclear ExperimentJournal of Molecular Structure: THEOCHEM
researchProduct

Aminoacid zwitterions in solution : Geometric, energetic, and vibrational analysis using density functional theory-continuum model calculations

1998

Glycine and alanine aminoacids chemistry in solution is explored using a hybrid three parameters density functional (B3PW91) together with a continuum model. Geometries, energies, and vibrational spectra of glycine and alanine zwitterions are studied at the B3PW91/6-31+G∗∗ level and the results compared with those obtained at the HF and MP2/6-31+G∗∗ levels. Solvents effects are incorporated by means of an ellipsoidal cavity model with a multipolar expansion (up to sixth order) of the solute’s electrostatic potential. Our results confirm the validity of the B3PW91 functional for studying aminoacid chemistry in solution. Taking into account the more favorable scaling behavior of density funct…

AlanineSixth orderChemistryContinuum (design consultancy)Ab initioGeneral Physics and AstronomyThermodynamicsUNESCO::FÍSICA::Química físicaComputational chemistryOrganic compoundsSolvent effectsOrganic compounds ; Vibrational states ; Density functional theory ; Solvent effectsDensity functional theoryDensity functional theoryVibrational statesPhysical and Theoretical Chemistry:FÍSICA::Química física [UNESCO]ScalingVibrational spectra
researchProduct