0000000001115576

AUTHOR

David C. Baulcombe

showing 4 related works from this author

Epigenetic and Genetic Contributions to Adaptation in Chlamydomonas

2017

Epigenetic modifications, such as DNA methylation or histone modifications, can be transmitted between cellular or organismal generations. However, there are no experiments measuring their role in adaptation, so here we use experimental evolution to investigate how epigenetic variation can contribute to adaptation. We manipulated DNA methylation and histone acetylation in the unicellular green alga Chlamydomonas reinhardtii both genetically and chemically to change the amount of epigenetic variation generated or transmitted in adapting populations in three different environments (salt stress, phosphate starvation, and high CO2) for two hundred asexual generations. We find that reducing the …

0106 biological sciences0301 basic medicinehiilidioksidiEpigenomicsAdaptation Biological01 natural sciencestolerance (physical)Epigenesis GeneticEpigenomicssietokyky2. Zero hungerGeneticsExperimental evolutionepigeneettinen periytyminenSalt Tolerancegreen algaeAdaptation PhysiologicalHistoneDNA methylationepigenetic inheritancephosphate starvationBiologyEnvironment010603 evolutionary biologysuolapitoisuus03 medical and health sciencesviherlevätGenetic variationGeneticsEpigeneticssalt contentexperimental evolutionravinnepitoisuusMolecular BiologyGeneEcology Evolution Behavior and Systematicssalt tolerancefosfaatitta1183ChlamydomonasGenetic Variationadaptive walkcarbon dioxideDNA Methylation030104 developmental biologyepigenetic mutationMutationbiology.proteinta1181methylationAdaptationDirected Molecular EvolutionChlamydomonas reinhardtii
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Abstracts of presentations on plant protection issues at the fifth international Mango Symposium Abstracts of presentations on plant protection issue…

1997

0106 biological sciencesZucchini yellow mosaic virusBarley stripe mosaic virusbiologyEcology (disciplines)Plant ScienceCoat proteinbiology.organism_classification01 natural sciencesCucumber mosaic virus010602 entomologyInsect ScienceInternational congressBotany010606 plant biology & botanyPhytoparasitica
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Viral fitness determines the magnitude of transcriptomic and epigenomic reprograming of defense responses in plants

2020

Although epigenetic factors may influence the expression of defense genes in plants, their role in antiviral responses and the impact of viral adaptation and evolution in shaping these interactions are still poorly explored. We used two isolates of turnip mosaic potyvirus with varying degrees of adaptation to Arabidopsis thaliana to address these issues. One of the isolates was experimentally evolved in the plant and presented increased load and virulence relative to the ancestral isolate. The magnitude of the transcriptomic responses was larger for the evolved isolate and indicated a role of innate immunity systems triggered by molecular patterns and effectors in the infection process. Sev…

0106 biological sciencesPotyvirusAdaptation BiologicalArabidopsisTurnip mosaic virus01 natural sciencesEpigenesis Genetic03 medical and health sciencesEpigenomeBiotic stressGeneticsPlant–virus interactionTurnip mosaic virusEpigeneticsMolecular BiologyGeneRNA-Directed DNA MethylationEcology Evolution Behavior and Systematics030304 developmental biologyEpigenomicsGenetics0303 health sciencesbiologyRNA-directed DNA methylationsystems biologyEpigenomevirus adaptationDNA Methylationbiology.organism_classificationBiological EvolutionRNA silencingExperimental evolutionHost-Pathogen InteractionsDNA methylationMethylomeGenetic FitnessTranscriptome010606 plant biology & botany
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Viral fitness determines the magnitude of transcriptomic and epigenomic reprogramming of defense responses in plants

2019

SUMMARYAlthough epigenetic factors may influence the expression of defense genes in plants, their role in antiviral responses and the impact of viral adaptation and evolution in shaping these interactions are still poorly explored. We used two isolates of turnip mosaic potyvirus (TuMV) with varying degrees of adaptation to Arabidopsis thaliana to address these issues. One of the isolates was experimentally evolved in the plant and presented increased load and virulence relative to the ancestral isolate. The magnitude of the transcriptomic responses were larger for the evolved isolate and indicated a role of innate immunity systems triggered by molecular patterns and effectors in the infecti…

GeneticsRNA silencingInnate immune systemDNA methylationfood and beveragesArabidopsis thalianaEpigeneticsBiologybiology.organism_classificationGeneChromatinEpigenomics
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