0000000001305075

AUTHOR

A. Alan Pinkerton

showing 8 related works from this author

Inter- and intramolecular bonding in 1,3,5-triamino-2,4,6-trinitrobenzene: An experimental and theoretical quantum theory of atoms in molecules (QTAI…

2017

Chemical bonding in the triclinic phase of 1,3,5-triamino-2,4,6-trinitrobenzene (TATB) has been analyzed based on the experimental electron density derived from X-ray diffraction data obtained at 20 K. The results have been compared with those from solid state theoretical calculations. The total electron density has been analyzed in terms of the Quantum Theory of Atoms in Molecules (QTAIM). Features of the covalent bonds demonstrate the presence of multiple bonds of various order. Strong intramolecular hydrogen bonds and weaker intermolecular bonds within the layer structure are characterized by the properties of their (3, −1) critical points. Weaker interactions, predominantly O···O, betwe…

Electron densityChemistryHydrogen bondAtoms in moleculesIntermolecular force02 engineering and technologyGeneral ChemistryTriclinic crystal system010402 general chemistry021001 nanoscience & nanotechnologyCondensed Matter Physics01 natural sciences0104 chemical sciencesChemical bondCovalent bondQuantum mechanicsIntramolecular forceGeneral Materials Science0210 nano-technologyCrystal Growth & Design
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Revised structure of trans-resveratrol: Implications for its proposed antioxidant mechanism

2015

The crystal structure of trans-resveratrol has been redetermined by X-ray diffraction. The newly refined structure demonstrates that the previously reported, dynamically disordered hydrogen-bonding network is rather the superposition of two crystallographically independent molecules of trans-resveratrol. This latter arrangement possesses a well-defined hydrogen-bonding network in a unit cell of double the previously reported volume. While not meant as a criticism of the proposed antioxidant mechanism itself, the present studies clearly show that the X-ray diffraction data should no longer be used for its additional support.

Models MolecularDiffractionStereochemistryClinical BiochemistryStructure (category theory)Pharmaceutical ScienceCrystal structureCrystallography X-Ray010402 general chemistry01 natural sciencesBiochemistryAntioxidantsStructure-Activity RelationshipStilbenesDrug DiscoveryMoleculeMolecular BiologyMolecular StructureTrans-resveratrol010405 organic chemistryHydrogen bondChemistryOrganic ChemistryHydrogen Bondingdisorder0104 chemical sciencesCrystallographyResveratrolMechanism (philosophy)Molecular MedicineX-ray structuresuperstructureSuperstructure (condensed matter)Bioorganic & Medicinal Chemistry Letters
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Experimental and Theoretical Electron Density Determination for Two Norbornene Derivatives: Topological Analysis Provides Insights on Reactivity

2016

The electron density distribution of two substituted norbornene derivatives (cis-5-norbornene-endo-2,3-dicarboxylic anhydride (1) and 7-oxabicylo[2.2.1]hept-5-ene-exo-2,3-dicarboxylic anhydride (2) has been determined from low-temperature (20 K) X-ray diffraction data and from DFT calculations with periodic boundary conditions. Topological analysis of the electron density is discussed with respect to exo-selective additions, the partial retro-Diels-Alder (rDA) character of the ground state, and intermolecular interaction energies.

ImaginationDiffractionElectron densityChemical substancemedia_common.quotation_subject010402 general chemistry010403 inorganic & nuclear chemistryTopology01 natural sciences0104 chemical scienceschemistry.chemical_compoundchemistryComputational chemistryPeriodic boundary conditionsReactivity (chemistry)Physical and Theoretical ChemistryGround stateNorbornenemedia_commonJournal of Physical Chemistry A
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Revisiting the charge density analysis of 2,5-dichloro-1,4-benzoquinone at 20 K

2017

A high-resolution X-ray diffraction measurement of 2,5-dichloro-1,4-benzoquinone (DCBQ) at 20 K was carried out. The experimental charge density was modeled using the Hansen–Coppens multipolar expansion and the topology of the electron density was analyzed in terms of the quantum theory of atoms in molecules (QTAIM). Two different multipole models, predominantly differentiated by the treatment of the chlorine atom, were obtained. The experimental results have been compared to theoretical results in the form of a multipolar refinement against theoretical structure factors and through direct topological analysis of the electron density obtained from the optimized periodic wavefunction. The si…

DiffractionElectron density202 engineering and technology010402 general chemistry01 natural sciencesMolecular physics14-Benzoquinonechemistry.chemical_compound5-di­chloro-1Materials Chemistryelectron densityWave functionIntermolecular forceAtoms in moleculesMetals and AlloysCharge density021001 nanoscience & nanotechnologyAtomic and Molecular Physics and Optics0104 chemical sciencesElectronic Optical and Magnetic MaterialsQTAIMchemistry4-benzo­quinonemultipole models0210 nano-technologyMultipole expansionActa Crystallographica Section B Structural Science, Crystal Engineering and Materials
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CCDC 1508075: Experimental Crystal Structure Determination

2016

Related Article: Christopher G. Gianopoulos, Bartosz Zarychta, Simone Cenedese, Vladimir V. Zhurov, A. Alan Pinkerton|2016|J.Phys.Chem.A|120|4059|doi:10.1021/acs.jpca.6b03787

Space GroupCrystallographyCrystal SystemCrystal StructureCell Parameters7-oxabicyclo(2.2.1)hept-5-ene-exo-23-dicarboxylic anhydrideExperimental 3D Coordinates
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CCDC 1549795: Experimental Crystal Structure Determination

2017

Related Article: Zhijie Chua, Christopher G. Gianopoulos, Bartosz Zarychta, Elizabeth A. Zhurova, Vladimir V. Zhurov, and A. Alan Pinkerton|2017|Cryst.Growth Des.|17|5200|doi:10.1021/acs.cgd.7b00674

Space GroupCrystallographyCrystal SystemCrystal StructureCell Parameters246-trinitrobenzene-135-triamineExperimental 3D Coordinates
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CCDC 1508074: Experimental Crystal Structure Determination

2016

Related Article: Christopher G. Gianopoulos, Bartosz Zarychta, Simone Cenedese, Vladimir V. Zhurov, A. Alan Pinkerton|2016|J.Phys.Chem.A|120|4059|doi:10.1021/acs.jpca.6b03787

Space GroupCrystallographyCrystal SystemCrystal Structurecis-5-norbornene-endo-23-dicarboxylic anhydrideCell ParametersExperimental 3D Coordinates
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CCDC 1440764: Experimental Crystal Structure Determination

2016

Related Article: Bartosz Zarychta, Christopher G. Gianopoulos, A. Alan Pinkerton|2016|Bioorg.Med.Chem.Lett.|26|1416|doi:10.1016/j.bmcl.2016.01.070

Space GroupCrystallographyCrystal SystemCrystal StructureCell Parameters5-(2-(4-hydroxyphenyl)vinyl)benzene-13-diolExperimental 3D Coordinates
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