0000000001309848
AUTHOR
Nir Hanin
Additional file 1: Table S1. of Genetic variation of naturally growing olive trees in Israel: from abandoned groves to feral and wild?
SSR markers used, their expected size range, repeated motives and number of alleles found in naturally growing olive populations. Raw microsatellite data is available and enclosed as Additional file 2: Table S2. (PDF 188 kb)
Additional file 5: Figure S2. of Genetic variation of naturally growing olive trees in Israel: from abandoned groves to feral and wild?
â K values for the different Ks were calculated according to Evanno et al. [56], showing that K = 3 is the optimal K for the Structure analysis. (PDF 69 kb)
Additional file 4: Figure S1. of Genetic variation of naturally growing olive trees in Israel: from abandoned groves to feral and wild?
Number of private alleles per locus in combinations of populations. A to D present values for the combination of two to five populations (treating scions and suckers of old olive trees as populations). (PDF 217 kb)
Additional file 6: Figure S3. of Genetic variation of naturally growing olive trees in Israel: from abandoned groves to feral and wild?
Location of populations of naturally growing olives analyzed in this study and of groves of cultivated old olive trees sampled in our previous study (Barazani et al. [33]). (PDF 79 kb)
Genetic variation of naturally growing olive trees in Israel: from abandoned groves to feral and wild?
Background Naturally growing populations of olive trees are found in the Mediterranean garrigue and maquis in Israel. Here, we used the Simple Sequence Repeat (SSR) genetic marker technique to investigate whether these represent wild var. sylvestris. Leaf samples were collected from a total of 205 trees at six sites of naturally growing olive populations in Israel. The genetic analysis included a multi-locus lineage (MLL) analysis, Rousset’s genetic distances, Fst values, private alleles, other diversity values and a Structure analysis. The analyses also included scions and suckers of old cultivated olive trees, for which the dominance of one clone in scions (MLL1) and a second in suckers (…
A comparative analysis of genetic variation in rootstocks and scions of old olive trees – a window into the history of olive cultivation practices and past genetic variation
Background Past clonal propagation of olive trees is intimately linked to grafting. However, evidence on grafting in ancient trees is scarce, and not much is known about the source of plant material used for rootstocks. Here, the Simple Sequence Repeat (SSR) marker technique was used to study genetic diversity of rootstocks and scions in ancient olive trees from the Levant and its implications for past cultivation of olives. Leaf samples were collected from tree canopies (scions) and shoots growing from the trunk base (suckers). A total of 310 trees were sampled in 32 groves and analyzed with 14 SSR markers. Results In 82.7% of the trees in which both scion and suckers could be genotyped, t…
Additional file 3: Table S3. of Genetic variation of naturally growing olive trees in Israel: from abandoned groves to feral and wild?
Number of olive trees assigned to different multi-locus lineages (MLLs). (XLSX 18 kb)
Additional file 2: Table S2. of Genetic variation of naturally growing olive trees in Israel: from abandoned groves to feral and wild?
Raw microsatellite data. The fragment sizes (in base pairs) of the two alleles per individual for each locus are given as a and b (0 represents missing data). (XLSX 38 kb)