0000000001314857

AUTHOR

Anton Granzhan

showing 9 related works from this author

“ One Ring to Bind Them All ”—Part I: The Efficiency of the Macrocyclic Scaffold for G-Quadruplex DNA Recognition

2010

International audience; Macrocyclic scaffolds are particularly attractive for designing selective G-quadruplex ligands essentially because, on one hand, they show a poor affinity for the "standard" B-DNA conformation and, on the other hand, they fit nicely with the external G-quartets of quadruplexes. Stimulated by the pioneering studies on the cationic porphyrin TMPyP4 and the natural product telomestatin, follow-up studies have developed, rapidly leading to a large diversity of macrocyclic structures with remarkable-quadruplex binding properties and biological activities. In this review we summarize the current state of the art in detailing the three main categories of quadruplex-binding …

ScaffoldArticle Subjectlcsh:QH426-470Review ArticleBiology010402 general chemistryBioinformaticsRing (chemistry)G-quadruplex01 natural sciencesBiochemistryTelomestatinlcsh:Biochemistrychemistry.chemical_compound[CHIM] Chemical Sciences[CHIM]Chemical Scienceslcsh:QD415-436Molecular BiologyDna recognitionComputingMilieux_MISCELLANEOUSNatural product010405 organic chemistryBinding propertiesPorphyrinCombinatorial chemistry3. Good health0104 chemical scienceslcsh:Geneticschemistry
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Dual targeting of higher-order DNA structures by azacryptands induces DNA junction-mediated DNA damage in cancer cells

2021

Abstract DNA is intrinsically dynamic and folds transiently into alternative higher-order structures such as G-quadruplexes (G4s) and three-way DNA junctions (TWJs). G4s and TWJs can be stabilised by small molecules (ligands) that have high chemotherapeutic potential, either as standalone DNA damaging agents or combined in synthetic lethality strategies. While previous approaches have claimed to use ligands that specifically target either G4s or TWJs, we report here on a new approach in which ligands targeting both TWJs and G4s in vitro demonstrate cellular effects distinct from that of G4 ligands, and attributable to TWJ targeting. The DNA binding modes of these new, dual TWJ-/G4-ligands w…

AcademicSubjects/SCI00010DNA damage[SDV]Life Sciences [q-bio][CHIM.THER] Chemical Sciences/Medicinal ChemistryCellAntineoplastic Agents[SDV.CAN]Life Sciences [q-bio]/CancerSynthetic lethality[CHIM.THER]Chemical Sciences/Medicinal ChemistryStructure-Activity Relationship03 medical and health scienceschemistry.chemical_compound0302 clinical medicineChemical Biology and Nucleic Acid Chemistry[SDV.CAN] Life Sciences [q-bio]/CancerNeoplasmsGeneticsmedicineHumans[CHIM]Chemical Sciences030304 developmental biology0303 health sciencesbiologyTopoisomeraseDNASmall moleculeIn vitroCell biologyG-Quadruplexesmedicine.anatomical_structurechemistry030220 oncology & carcinogenesisCancer cellMCF-7 Cellsbiology.proteinAzabicyclo CompoundsDNADNA Damage
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Identification of Three-Way DNA Junction Ligands through Screening of Chemical Libraries and Validation by Complementary in Vitro Assays

2019

International audience; The human genome is replete with repetitive DNA sequences that can fold into thermodynamically stable secondary structures such as hairpins and quadruplexes. Cellular enzymes exist to cope with these structures whose stable accumulation would result in DNA damage through interference with DNA transactions such as transcription and replication. Therefore, the chemical stabilization of secondary DNA structures offers an attractive way to foster DNA transaction-associated damages to trigger cell death in proliferating cancer cells. While much emphasis has been recently given to DNA quadruplexes, we focused here on three-way DNA junctions (TWJ) and report on a strategy t…

Spectrometry Mass Electrospray IonizationDNA damageElectrospray ionization[CHIM.THER] Chemical Sciences/Medicinal ChemistrySulforhodamine BAntineoplastic Agents[SDV.CAN]Life Sciences [q-bio]/Cancer[CHIM.THER]Chemical Sciences/Medicinal ChemistryLigands01 natural sciencesSmall Molecule Libraries03 medical and health scienceschemistry.chemical_compoundTranscription (biology)Cell Line Tumor[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]Drug DiscoveryFluorescence Resonance Energy Transfer[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyHumans[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyRepeated sequenceCell Proliferation030304 developmental biology0303 health sciencesDNA0104 chemical sciences010404 medicinal & biomolecular chemistryFörster resonance energy transferBiochemistrychemistryNucleic Acid ConformationMolecular MedicineElectrophoresis Polyacrylamide GelHuman genomeDNA
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Recognition of G-quadruplex DNA by triangular star-shaped compounds: with or without side chains?

2011

International audience; We report the synthesis of two new series of triangular aromatic platforms, either with three aminoalkyl side chains (triazatrinaphthylene series, TrisK: six compounds), or without side chains (triazoniatrinaphthylene, TrisQ). The quadruplex-DNA binding behavior of the two series, which differ essentially by the localization of the cationic charges, was evaluated by means of FRET-melting and G4-FID assays. For the trisubstituted triazatrinaphthylenes (TrisK), the length of the substituents and the presence of terminal hydrogen-bond-donor groups (NH(2)) were shown to be crucial for ensuring a high quadruplex affinity (ΔT(1/2) values of up to 20 °C at 1 μM for the best…

Models MolecularStereochemistryIonic bonding010402 general chemistryG-quadruplexLigands01 natural sciencesCatalysischemistry.chemical_compoundStructure-Activity RelationshipHeterocyclic Compounds[CHIM] Chemical SciencesSide chainMoleculeStructure–activity relationship[CHIM]Chemical SciencesComputingMilieux_MISCELLANEOUSMolecular Structure010405 organic chemistryHydrogen bond[CHIM.ORGA]Chemical Sciences/Organic chemistryOrganic ChemistryGeneral Chemistry0104 chemical sciencesG-QuadruplexeschemistryAcridinesSelectivityAzo CompoundsDNAChemistry (Weinheim an der Bergstrasse, Germany)
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Disclosing the actual efficiency of G-quadruplex-DNA–disrupting small molecules

2020

AbstractThe quest for small molecules that avidly bind to G-quadruplex-DNA (G4-DNA, or G4), so called G4-ligands, has invigorated the G4 research field from its very inception. Massive efforts have been invested to i- screen or design G4-ligands, ii- evaluate their G4-interacting properties in vitro through a series of now widely accepted and routinely implemented assays, and iii- use them as unique chemical biology tools to interrogate cellular networks that might involve G4s. In sharp contrast, only uncoordinated efforts at developing small molecules aimed at destabilizing G4s have been invested to date, even though it is now recognized that such molecular tools would have tremendous appl…

0303 health sciencesComputer scienceChemical biology[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biology[CHIM.THER]Chemical Sciences/Medicinal ChemistryComputational biology010402 general chemistryG-quadruplex01 natural sciencesSmall moleculeIn vitro0104 chemical sciences03 medical and health scienceschemistry.chemical_compoundchemistryDNA030304 developmental biology
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DNA Junction Ligands Trigger DNA Damage and Are Synthetic Lethal with DNA Repair Inhibitors in Cancer Cells.

2019

International audience; Translocation of DNA and RNA polymerases along their duplex substrates results in DNA supercoiling. This torsional stress promotes the formation of plectonemic structures, including three-way DNA junction (TWJ), which can block DNA transactions and lead to DNA damage. While cells have evolved multiple mechanisms to prevent the accumulation of such structures, stabilizing TWJ through ad hoc ligands offer an opportunity to trigger DNA damage in cells with high level of transcription and replication, such as cancer cells. Here, we develop a series of azacryptand-based TWJ ligands, we thoroughly characterize their TWJ-interacting properties in vitro and demonstrate their…

DNA RepairDNA repairDNA damage[SDV]Life Sciences [q-bio][SDV.CAN]Life Sciences [q-bio]/CancerSynthetic lethality[CHIM.THER]Chemical Sciences/Medicinal Chemistry010402 general chemistryLigands01 natural sciencesBiochemistryCatalysischemistry.chemical_compoundColloid and Surface ChemistryTranscription (biology)Cell Line TumorHumansPolymeraseCell Proliferationbiology[CHIM.ORGA]Chemical Sciences/Organic chemistryGeneral ChemistryDNA3. Good health0104 chemical sciencesCell biologychemistryCancer cellbiology.proteinMCF-7 CellsDNA supercoilNucleic Acid ConformationDNADNA DamageJournal of the American Chemical Society
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“One Ring to Bind Them All”—Part II: Identification of Promising G-Quadruplex Ligands by Screening of Cyclophane-Type Macrocycles

2010

A collection of 26 polyammonium cyclophane-type macrocycles with a large structural diversity has been screened for G-quadruplex recognition. A two-step selection procedure based on the FRET-melting assay was carried out enabling identification of macrocycles of high affinity (ΔT1/2up to30°C) and high selectivity for the human telomeric G-quadruplex. The four selected hits possess sophisticated architectures, more particularly the presence of a pendant side-arm as well as the existence of a particular topological arrangement appear to be strong determinants of quadruplex binding. These compounds are thus likely to create multiple contacts with the target that may be at the origin of their h…

lcsh:QH426-470Article SubjectHigh selectivityStructural diversityBiology010402 general chemistryRing (chemistry)G-quadruplexBioinformatics01 natural sciencesBiochemistrylcsh:Biochemistry03 medical and health scienceschemistry.chemical_compound[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular Biology[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular Biologylcsh:QD415-436Molecular Biology030304 developmental biology0303 health sciencesCombinatorial chemistry0104 chemical scienceslcsh:GeneticschemistryIdentification (biology)CyclophaneResearch ArticleJournal of Nucleic Acids
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CCDC 1952718: Experimental Crystal Structure Determination

2020

Related Article: Katerina Duskova, Pauline Lejault, Élie Benchimol, Régis Guillot, Sébastien Britton, Anton Granzhan, David Monchaud|2019|J.Am.Chem.Soc.|142|424|doi:10.1021/jacs.9b11150

Space GroupCrystallographyCrystal SystemCrystal StructureCell ParametersExperimental 3D Coordinates102845-trioxa-14161922343951-octa-azaoctacyclo[17.17.17.269.21114.22427.22932.24144.24649]pentahexaconta-6811132426293141434648545658606264-octadecaene-41622343951-hexaium hexachloride methanol solvate hydrate
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CCDC 782553: Experimental Crystal Structure Determination

2016

Related Article: Hélène Bertrand, Anton Granzhan, David Monchaud, Nicolas Saettel, Régis Guillot, Sarah Clifford, Aurore Guédin, Jean-Louis Mergny, Marie-Paule Teulade-Fichou|2011|Chem.-Eur.J.|17|4529|doi:10.1002/chem.201002810

dipyrido[12-b:1'2'-j]quinolizino[32-f][28]phenanthrolinetriium tris(tetrafluoroborate) monohydrateSpace GroupCrystallographyCrystal SystemCrystal StructureCell ParametersExperimental 3D Coordinates
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