0000000001333021
AUTHOR
Pölönen, Ilkka
Original data for study: Rapid quantification of microalgae with hyperspectral camera and vegetation indices
Spectral cameras are traditionally used in remote sensing of microalgae but increasingly also in laboratory-scale applications to study and monitor algae biomass in cultures. Practical and cost-efficient protocols for collecting and analyzing hyperspectral data are currently needed. The purpose of this study was to test a commercial, easy-to-use hyperspectral camera to monitor the growth of different algae strains in liquid samples. Indices calculated from wavebands from transmission imaging were compared against algae abundance and wet biomass obtained from an electronic cell counter, chlorophyll a concentration and chlorophyll fluorescence. A ratio of selected wavebands containing near in…
Assessment of microalgae species, biomass and distribution from spectral images using a convolution neural network
Artikkeliin "Assessment of microalgae species, biomass and distribution from spectral images using a convolution neural network" liittyvä aineisto koostuu seuraavista osista: 1.Transmittanssi-hyperspektrikuvat levänäytteistä kuvattuina 24-kuoppalevyllä 2.Biomassamääritykset elektronisella solulaskurilla 3.Opetus- ja validointiaineisto konvoluutioneuroverkolle 4.Testiaineisto konvoluutioneuroverkolle 5.Opetus-, validointi- ja testiaineiston käsittelyyn käytetty Python koodi 6.Seitsemään eri malliin käytetty Python koodi ja mallit itsessään The data and code related to the article "Assessment of microalgae species, biomass and distribution from spectral images using a convolution neural netwo…