6533b7dbfe1ef96bd12713d4

RESEARCH PRODUCT

Working with (too) Few Samples

Francisco MontesGuillermo AyalaAngela L. Riffo-campos

subject

Set (abstract data type)TranscriptomeDifferential expression analysisColorectal cancerResamplingmedicineComputational biologyBiologymedicine.diseaseGene

description

This paper is concerned with gene set differential expression analysis. We compare the transcriptomic behaviour of each gene set between different experimental conditions.The gene set is previously defined. It has been used a gene set collection downloaded from Gene Ontology.A randomization test is proposed and compared with other previous procedures using a RNA-seq experiment of colorectal cancer (CRC).

yearjournalcountryeditionlanguage
2018-01-01
https://doi.org/10.1007/978-3-319-73848-2_32