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RESEARCH PRODUCT
Automatic Biological Cell Counting Using a Modified Gradient Hough Transform
Stéphane GuyotLudovic JournauxAmbroise MarinPaul MolinEmmanuel Denimalsubject
Microbiological Techniques0301 basic medicineCountingComputer scienceColony Count Microbial02 engineering and technologyPattern Recognition AutomatedHough transformlaw.inventionAutomation03 medical and health sciencesMatrix (mathematics)Digital imageCirclelawYeasts[SDV.IDA]Life Sciences [q-bio]/Food engineeringImage Processing Computer-AssistedMicroscopic imageInstrumentationMicroscopybusiness.industryClinical Coding[ SDV.IDA ] Life Sciences [q-bio]/Food engineeringPattern recognition021001 nanoscience & nanotechnologyObject detectionPeak detection030104 developmental biologyCoughSaccharomycetalesImagesBiological cellArtificial intelligenceCell0210 nano-technologybusinessAlgorithmsPhase codingdescription
AbstractWe present a computational method for pseudo-circular object detection and quantitative characterization in digital images, using the gradient accumulation matrix as a basic tool. This Gradient Accumulation Transform (GAT) was first introduced in 1992 by Kierkegaard and recently used by Kaytanli & Valentine. In the present article, we modify the approach by using the phase coding studied by Cicconet, and by adding a “local contributor list” (LCL) as well as a “used contributor matrix” (UCM), which allow for accurate peak detection and exploitation. These changes help make the GAT algorithm a robust and precise method to automatically detect pseudo-circular objects in a microscopic image. We then present an application of the method to cell counting in microbiological images.
year | journal | country | edition | language |
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2017-02-01 |