6533b82bfe1ef96bd128e38e
RESEARCH PRODUCT
Disentangling the rhizosphere effect on nitrate reducers and denitrifiers: insight into the role of root exudates.
David BruS. HalletLaurent PhilippotD. ChènebyS. TexierSonia HenryF. BizouardChristophe DambrevilleJ. C. Germonsubject
BACTERIAL COMMUNITY STRUCTURE REAL-TIME PCRDNA BacterialDenitrificationMolecular Sequence DataDIVERSITYBiologyGENETIC-STRUCTURENIRKNitrate reductaseMicrobiologyPlant RootsZea mays03 medical and health scienceschemistry.chemical_compoundNitrateBacterial ProteinsBotanyPLANTSSugarEcology Evolution Behavior and SystematicsNitritesSoil Microbiology030304 developmental biology2. Zero hunger0303 health sciencesRhizosphereNitratesBacteria04 agricultural and veterinary sciencesBiodiversitySequence Analysis DNA6. Clean waterCarbonSOIL[SDV.MP]Life Sciences [q-bio]/Microbiology and Parasitologychemistry13. Climate actionEnvironmental chemistrySoil water040103 agronomy & agriculture0401 agriculture forestry and fisheriesComposition (visual arts)MicrocosmOxidoreductasesOxidation-ReductionMAIZENOSZ GENESdescription
International audience; To determine to which extent root-derived carbon contributes to the effects of plants on nitrate reducers and denitrifiers, four solutions containing different proportions of sugar, organic acids and amino acids mimicking maize root exudates were added daily to soil microcosms at a concentration of 150 μg C g−1 of soil. Water-amended soils were used as controls. After 1 month, the size and structure of the nitrate reducer and denitrifier communities were analysed using the narG and napA, and the nirK, nirS and nosZ genes as molecular markers respectively. Addition of artificial root exudates (ARE) did not strongly affect the structure or the density of nitrate reducer and denitrifier communities whereas potential nitrate reductase and denitrification activities were stimulated by the addition of root exudates. An effect of ARE composition was also observed on N2O production with an N2O:(N2O + N2) ratio of 0.3 in microcosms amended with ARE containing 80% of sugar and of 1 in microcosms amended with ARE containing 40% of sugar. Our study indicated that ARE stimulated nitrate reduction or denitrification activity with increases in the range of those observed with the whole plant. Furthermore, we demonstrated that the composition of the ARE affected the nature of the end-product of denitrification and could thus have a putative impact on greenhouse gas emissions.
year | journal | country | edition | language |
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2008-01-01 | Environmental microbiology |