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RESEARCH PRODUCT

Efficient DNA Packaging of Bacteriophage PRD1 Requires the Unique Vertex Protein P6

Nelli J. KarhuGabija ZiedaiteJaana K. H. BamfordDennis H. Bamford

subject

Specificity factorImmunologyMutantBiologymedicine.disease_causeMicrobiologyBacteriophageViral Proteins03 medical and health scienceschemistry.chemical_compoundVirologyDNA PackagingmedicineBacteriophage PRD1Lipid bilayer030304 developmental biology0303 health sciencesMutationStructure and AssemblyVirus Assembly030302 biochemistry & molecular biologyVirionTectivirusSalmonella entericabiology.organism_classificationMolecular biologychemistryCapsidInsect ScienceMutationBiophysicsDNA

description

ABSTRACT The assembly of bacteriophage PRD1 proceeds via formation of empty procapsids containing an internal lipid membrane, into which the linear double-stranded DNA genome is subsequently packaged. The packaging ATPase P9 and other putative packaging proteins have been shown to be located at a unique vertex of the PRD1 capsid. Here, we describe the isolation and characterization of a suppressor-sensitive PRD1 mutant deficient in the unique vertex protein P6. Protein P6 was found to be an essential part of the PRD1 packaging machinery; its absence leads to greatly reduced packaging efficiency. Lack of P6 was not found to affect particle assembly, because in the P6-deficient mutant infection, wild-type (wt) amounts of particles were produced, although most were empty. P6 was determined not to be a specificity factor, as the few filled particles seen in the P6-deficient infection contained only PRD1-specific DNA. The presence of P6 was not necessary for retention of DNA in the capsid once packaging had occurred, and P6-deficient DNA-containing particles were found to be stable and infectious, albeit not as infectious as wt PRD1 virions. A packaging model for bacteriophage PRD1, based on previous results and those obtained in this study, is presented.

https://doi.org/10.1128/jvi.02211-06