6533b832fe1ef96bd129adcf

RESEARCH PRODUCT

Construction of a dual chain pseudotetrameric chicken avidin by combining two circularly permuted avidins.

Sanna T.h. UotilaEevaleena J. PorkkaOlli H. LaitinenVesa P. HytönenMarkku S. KulomaaHenri R. Nordlund

subject

Models MolecularBiotin bindingProtein DenaturationProtein FoldingStereochemistryProtein ConformationProtein subunitMolecular Sequence DataGlycineBiotinBiochemistrySensitivity and SpecificityProtein Structure Secondarystomatognathic systemChain (algebraic topology)SerineAnimalsAmino Acid SequenceBinding siteProtein Structure QuaternaryMolecular BiologyLinker peptideBinding SitesbiologyCell Biologyrespiratory systemAvidinProtein Structure TertiaryCrystallographyKineticsMutationbiology.proteinChromatography GelElectrophoresis Polyacrylamide GelEndopeptidase KPeptidesLinkerChickensAvidinProtein Binding

description

Two distinct circularly permuted forms of chicken avidin were designed with the aim of constructing a fusion avidin containing two biotin-binding sites in one polypeptide. The old N and C termini of wild-type avidin were connected to each other via a glycine/serine-rich linker, and the new termini were introduced into two different loops. This enabled the creation of the desired fusion construct using a short linker peptide between the two different circularly permuted subunits. The circularly permuted avidins (circularly permuted avidin 5 → 4 and circularly permuted avidin 6 → 5) and their fusion, pseudotetrameric dual chain avidin, were biologically active, i.e. showed biotin binding, and also displayed structural characteristics similar to those of wild-type avidin. Dual chain avidin facilitates the development of dual affinity avidins by allowing adjustment of the ligand-binding properties in half of the binding sites independent of the other half. In addition, the subunit fusion strategy described in this study can be used, where applicable, to modify oligomeric proteins in general.

10.1074/jbc.m403496200https://pubmed.ncbi.nlm.nih.gov/15131113