6533b835fe1ef96bd129f72f
RESEARCH PRODUCT
Quantitatively characterizing drug-induced arrhythmic contractile motions of human stem cell-derived cardiomyocytes.
Sabir JacquirShin Hyuk BangNathaniel HuebschBruce R. ConklinBrian SiemonsKevin E. HealyZhen MaPlansky Hoangsubject
0301 basic medicineComputer scienceImage ProcessingComputational algorithmArrhythmiasRegenerative MedicineCardiovascularApplied Microbiology and Biotechnologyphase space reconstruction0302 clinical medicineComputer-AssistedImage Processing Computer-AssistedMyocytes CardiacComputingMilieux_MISCELLANEOUS[ INFO.INFO-IM ] Computer Science [cs]/Medical ImagingStem Cell Research - Induced Pluripotent Stem Cell - HumanOptical ImagingHeart DiseaseNetworking and Information Technology R&DStem cellBiological systemCardiacBiotechnologyCytological TechniquesInduced Pluripotent Stem CellsOptical flowTorsades de pointesImage processingBioengineeringarrhythmiaArticlebiosignal processingoptical flow03 medical and health sciencesMotionMatch movingmedicine[INFO.INFO-IM]Computer Science [cs]/Medical ImagingHumansMyocytesStem Cell Research - Induced Pluripotent Stem CellCardiac arrhythmiaArrhythmias CardiacTissue physiologymedicine.diseaseStem Cell ResearchMyocardial Contractioncardiac motion030104 developmental biology030217 neurology & neurosurgerySoftwaredescription
Quantification of abnormal contractile motions of cardiac tissue has been a noteworthy challenge and significant limitation in assessing and classifying the drug-induced arrhythmias (i.e. Torsades de pointes). To overcome these challenges, researchers have taken advantage of computational image processing tools to measure contractile motion from cardiomyocytes derived from human induced pluripotent stem cells (hiPSC-CMs). However, the amplitude and frequency analysis of contractile motion waveforms doesn't produce sufficient information to objectively classify the degree of variations between two or more sets of cardiac contractile motions. In this paper, we generated contractile motion data from beating hiPSC-CMs using motion tracking software based on optical flow analysis, and then implemented a computational algorithm, phase space reconstruction (PSR), to derive parameters (embedding, regularity, and fractal dimensions) to further characterize the dynamic nature of the cardiac contractile motions. Application of drugs known to cause cardiac arrhythmia induced significant changes to these resultant dimensional parameters calculated from PSR analysis. Integrating this new computational algorithm with the existing analytical toolbox of cardiac contractile motions will allow us to expand current assessments of cardiac tissue physiology into an automated, high-throughput, and quantifiable manner which will allow more objective assessments of drug-induced proarrhythmias. This article is protected by copyright. All rights reserved.
year | journal | country | edition | language |
---|---|---|---|---|
2018-04-16 |