6533b836fe1ef96bd12a1c6d

RESEARCH PRODUCT

Implementation of a gene panel for the genetic diagnosis of primary ciliary dyskinesia

Maria ColsAna ReulaMiguel Armengot CarcellerSilvia Castillo CorullónEduardo F. TizzanoAraceli CaballeroCarlos Martín De VicenteNoelia Baz RedonOscar AsensioMónica Fernández CancioAntonio Moreno GaldóNúria Camats TarruellaSandra Rovira AmigoAmparo EscribanoIda ParamonovFrancisco Dasí

subject

business.industryDiseaseCompound heterozygositymedicine.diseaseBioinformatics03 medical and health sciences0302 clinical medicine030228 respiratory systemGene panelCohortMedicineIn patient030212 general & internal medicineGenetic diagnosisbusinessGenePrimary ciliary dyskinesia

description

Background: Primary ciliary dyskinesia (PCD) is a disease characterized by an alteration in the ciliary structure that causes an abnormal clearance of respiratory secretions. Its diagnosis is complex and is based on a combination of different techniques. The objective of this study was to design a gene panel including all known caustive genes, and to verify the utility for diagnostic in a cohort of Spanish patients. Methods: Multicenter cross-sectional study of patients with high suspicion of PCD, applying the criteria of the European Respiratory Society. Design a gene panel for mass sequencing with SeqCap EZ technology, including 44 PCD-related genes. Results: 79 patients were included, 53 of those diagnosed with confirmed or highly likely PCD. The sensitivity of the gene panel was 81.1% with a specificity of 100%. Candidate variants were found in any of the panel genes 43 patients with PCD, with 51.2% (22/43) homozygous and 48.8% (21/43) compound heterozygous. The most common causal genes were DNAH5 and CCDC39, in patients of Caucasian origin, while in non-Caucasian ones the most common causal genes were CCDC40, DNAI2 and RSPH4A. We found 52 different variants, 36 not previously described in the literature. Conclusions: The results of this study show that the design and implementation of an specific gene panel has a high efficiency forgenetic diagnostic of PCD, allowing for a better understanding of the causal of this disease and laying the basis for future therapeutic approaches

https://doi.org/10.1183/13993003.congress-2020.5293