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RESEARCH PRODUCT
Positive selection in development and growth rate regulation genes involved in species divergence of the genus Radix
Barbara FeldmeyerIngo EbersbergerElisabeth FunkeBastian GreshakeMarkus Pfenningersubject
ClimateSnailsZoologyLife history theorySpecies SpecificityPhylogeneticsAnimalsRNA-SeqAdaptationSelection GeneticTranscriptomicsEcosystemPhylogenyEcology Evolution Behavior and SystematicsEcological nicheMollusksNatural selectionbiologyPhylogenetic treeGene Expression ProfilingReproductive isolationbiology.organism_classificationReproductive isolationBiological EvolutionReproductive isolation ; RNA-Seq ; Transcriptomics ; Adaptive sequence evolution ; Positive selection ; Mollusks ; AdaptationPositive selectionEuropeGene Expression RegulationEvolutionary biologyAdaptationAdaptive sequence evolutionResearch ArticleRadix (gastropod)description
AbstractBackgroundLife history traits like developmental time, age and size at maturity are directly related to fitness in all organisms and play a major role in adaptive evolution and speciation processes. Comparative genomic or transcriptomic approaches to identify positively selected genes involved in species divergence can help to generate hypotheses on the driving forces behind speciation. Here we use a bottom-up approach to investigate this hypothesis by comparative analysis of orthologous transcripts of four closely related EuropeanRadixspecies.ResultsSnails of the genusRadixoccupy species specific distribution ranges with distinct climatic niches, indicating a potential for natural selection driven speciation based on ecological niche differentiation. We then inferred phylogenetic relationships among the fourRadixspecies based on whole mt-genomes plus 23 nuclear loci. Three different tests to infer selection and changes in amino acid properties yielded a total of 134 genes with signatures of positive selection. The majority of these genes belonged to the functional gene ontology categories “reproduction” and “genitalia” with an overrepresentation of the functions “development” and “growth rate”.ConclusionsWe show here thatRadixspecies divergence may be primarily enforced by selection on life history traits such as (larval-) development and growth rate. We thus hypothesise that life history differences may confer advantages under the according climate regimes, e.g., species occupying warmer and dryer habitats might have a fitness advantage with fast developing susceptible life stages, which are more tolerant to habitat desiccation.
year | journal | country | edition | language |
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2015-08-01 | BMC Evolutionary Biology |