6533b86dfe1ef96bd12ca946

RESEARCH PRODUCT

Estimation of atrazine-degrading genetic potential and activity in three French agricultural soils

Lionel RanjardGuy SoulasLaurent CornetJuan-carlos López-gutiérrezLaurent PhilippotGérard CatrouxFabrice Martin-laurentRémi ChaussodChristophe Schwartz

subject

DNA BacterialEAU USEEAmendment010501 environmental sciencesBiologyPolymerase Chain ReactionZea mayscomplex mixtures01 natural sciencesApplied Microbiology and BiotechnologyMicrobiologychemistry.chemical_compoundBacterial ProteinsAtrazine[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyBiotransformationSoil MicrobiologyComputingMilieux_MISCELLANEOUS0105 earth and related environmental sciences2. Zero hungerBacteriaEcologybusiness.industryCommunity structureBiodiversity04 agricultural and veterinary sciences15. Life on landSoil typeDNA FingerprintingBiotechnology[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyAgronomyMicrobial population biologyWastewaterchemistrySoil water040103 agronomy & agriculture0401 agriculture forestry and fisheriesAtrazineFrancebusinessSludge

description

The impact of organic amendment (sewage sludge or waste water) used to fertilize agricultural soils was estimated on the atrazine-degrading activity, the atrazine-degrading genetic potential and the bacterial community structure of soils continuously cropped with corn. Long-term application of organic amendment did not modify atrazine-mineralizing activity, which was found to essentially depend on the soil type. It also did not modify atrazine-degrading genetic potential estimated by quantitative PCR targeting atzA, B and C genes, which was shown to depend on soil type. The structure of soil bacterial community determined by RISA fingerprinting was significantly affected by organic amendment. These results showed that modification of the structure of soil bacterial community in response to organic amendment is not necessarily accompanied by a modification of atrazine-degrading genetic potential or activity. In addition, these results revealed that different soils showing similar atrazine-degrading genetic potentials may exhibit different atrazine-degrading activities.

https://hal.inrae.fr/hal-02677246