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RESEARCH PRODUCT
Stappia alba sp. nov., isolated from Mediterranean oysters
Esperanza GarayMaría J. PujalteM. Carmen MaciánDavid R. Arahalsubject
OysterbiologyMolecular Sequence DataStappiaPannonibacterAggregataOyster farmingbiology.organism_classification16S ribosomal RNAOstreidaePolymerase Chain ReactionApplied Microbiology and BiotechnologyMicrobiologyRoseibiumRNA BacterialSpecies SpecificitySpainRNA Ribosomal 16Sbiology.animalBotanyAnimalsRibosomal DNAPhylogenyEcology Evolution Behavior and SystematicsAlphaproteobacteriadescription
Abstract Three bacterial strains isolated from oysters recovered at the Spanish Mediterranean coast have been phenotypically and genetically characterized. The results of the phylogenetic analysis based on almost complete 16S rDNA sequences clustered all three strains together with 99.9% average sequence similarity and situated them in the neighbourhood of the genera Stappia , Roseibium and Pannonibacter , Stappia aggregata being their closest neighbour with sequence similarities between 98.8% and 98.9%. DNA–DNA hybridization experiments using DNA of strains 5OM6 T and S. aggregata CECT 4269 T as reference DNAs confirmed the independent status at species level of the oyster isolates. Phenotypically, they can be distinguished from the closest relatives by the ionic requirements, growth temperatures and use of carbon compounds. We propose these oyster strains constitute a new species of Stappia , for which the name Stappia alba sp. nov. has been chosen, and strain 5OM6 T (=CECT 5095 T =CIP 108402 T ) as its type strain.
year | journal | country | edition | language |
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2005-11-03 | Systematic and Applied Microbiology |