Search results for " 28S"

showing 8 items of 28 documents

Phylogenetic relationship among genera of Polymorphidae (Acanthocephala), inferred from nuclear and mitochondrial gene sequences.

2013

Abstract Acanthocephalans of the family Polymorphidae Meyer, 1931 are obligate endoparasites with complex life cycles. These worms use vertebrates (marine mammals, fish-eating birds and waterfowl) as definitive hosts and invertebrates (amphipods, decapods and euphausiids) as intermediate hosts to complete their life cycle. Polymorphidae has a wordwide distribution, containing 12 genera, with approximately 127 species. The family is diagnosed by having a spinose trunk, bulbose proboscis, double-walled proboscis receptacle, and usually four to eight tubular cement glands. To conduct a phylogenetic analysis, in the current study sequences of the small (18S) and large-subunit (28S) ribosomal RN…

ProfilicollisZoologyBiologyAcanthocephalaPolymorphidaeElectron Transport Complex IVEvolution MolecularMonophylyPhylogeneticsRNA Ribosomal 28SGeneticsRNA Ribosomal 18SAnimalsMolecular BiologyEcology Evolution Behavior and SystematicsGenes HelminthPhylogenyLikelihood FunctionsPhylogenetic treeModels GeneticBayes Theorembiology.organism_classificationMaximum parsimonyGenes MitochondrialCladogramRNA HelminthAcanthocephalaMultilocus Sequence TypingMolecular phylogenetics and evolution
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Aporocotyle mariachristinae n. sp., and A. ymakara VillalbaFernández, 1986 (Digenea: Aporocotylidae) of the pink cusk-eel, Genypterus blacodes (Ophid…

2012

Aporocotyle mariachristinae n. sp. and A. ymakara Villalba & Fernández, 1986 were collected from the bulbus arteriosus and ventral aorta of pink cusk-eels, Genypterus blacodes (Forster, 1801) from Patagonia, Argentina. A. mariachristinae n. sp. can be distinguished from all the species of Aporocotyle by the asymmetrical extension of posterior caeca (right posterior caecum longer, terminating at the area between mid-level of ovary and posterior body end; left posterior caecum shorter, terminating at the area between mid-level of cirrus sac and posterior to reproductive organs), the distribution of spines along the ventro-lateral body margins and the number of testes. The new species clearly …

RDNA SEQUENCESADN ribosomiqueOphidiiformesA. MARIACHRISTINAE N. SP.Aporocotyle//purl.org/becyt/ford/1 [https]A. YMAKARAFish DiseasesAPOROCOTYLIDAERNA Ribosomal 28SPatagoniaOPHIDIIDAEPatagonieAortaARGENTINAEelsbiologyHeartAnatomyGenypterus blacodesOriginal ContributionA. mariachristinae n. sp.PATAGONIAInfectious DiseasesGenypterus blacodesSÉQUENÇAGETrematodaTrematodaArgentinePATAGONIECIENCIAS NATURALES Y EXACTASGENYPTERUS BLACODESVeterinary (miscellaneous)Otras Ciencias BiológicasArgentinaBulbus arteriosusTrematode InfectionsDNA RibosomalDigeneaMerlucciuslcsh:Infectious and parasitic diseasesCaecumCiencias BiológicasOphidiidaeséquençageRNA Ribosomal 18SAnimalslcsh:RC109-216//purl.org/becyt/ford/1.6 [https]ARGENTINErDNA sequencesAPOROCOTYLEA. ymakarabiology.organism_classificationAporocotyleADN RIBOSOMIQUEAporocotylidaeInsect ScienceAnimal Science and ZoologyParasitologyParasite (Paris, France)
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Morphological and molecular redescription of the myxozoanUnicapsula pflugfelderiSchubert, Sprague & Reinboth 1975 from two teleost hosts in the M…

2009

Elongate plasmodia with myxosporean spores belonging to the genus Unicapsula, Davis, 1924 were found in the skeletal muscle of the striped seabream, Lithognathus mormyrus (L.), a candidate for the mediterranean aquaculture. The only species of Unicapsula described from the Mediterranean is Unicapsula pflugfelderi Schubert et al. 1975, which occurs in the picarel, Spicara smaris (L.). For morphological and molecular comparison of U. pflugfelderi from S. smaris with Unicapsula sp. from L. mormyrus measurements of plasmodia and spores, ultrastructural details and 18S and 28S rDNA sequences were analysed. Whereas plasmodia were 2-3 times larger in S. smaris than in L. mormyrus (length 2.47-0.81…

Striped seabreamParasitic Diseases AnimalVeterinary (miscellaneous)ZoologyAquatic ScienceBiologyFish DiseasesMicroscopy Electron TransmissionSpecies SpecificityRNA Ribosomal 28SMediterranean SeaRNA Ribosomal 18SAnimalsSpicara smarisMyxozoaMuscle SkeletalRibosomal DNAPhylogenyMormyrusSporoplasmfungibiology.organism_classificationSea BreamPerciformesSporeDNA GyraseMicroscopy Electron ScanningUltrastructureTaxonomy (biology)Journal of Fish Diseases
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Molecules and morphology reveal cryptic variation among digeneans infecting sympatric mullets in the Mediterranean.

2009

SUMMARYWe applied a combined molecular and morphological approach to resolve the taxonomic status of Saccocoelium spp. parasitizing sympatric mullets (Mugilidae) in the Mediterranean. Eight morphotypes of Saccocoelium were distinguished by means of multivariate statistical analyses: 2 of Saccocoelium obesum ex Liza spp.; 4 of S. tensum ex Liza spp.; and 2 (S. cephali and Saccocoelium sp.) ex Mugil cephalus. Sequences of the 28S and ITS2 rRNA gene regions were obtained for a total of 21 isolates of these morphotypes. Combining sequence data analysis with a detailed morphological and multivariate morphometric study of the specimens allowed the demonstration of cryptic diversity thus rejecting…

SympatrySpecies complexMolecular Sequence DataZoologyTrematode InfectionsFish DiseasesSpecies SpecificityGenetic variationDNA Ribosomal SpacerRNA Ribosomal 28SMediterranean SeaAnimalsRibosomal DNAPhylogenyGenetic diversitybiologyMugilGenetic VariationSequence Analysis DNADNA Helminthbiology.organism_classificationSmegmamorphaGenetic divergenceInfectious DiseasesSympatric speciationAnimal Science and ZoologyParasitologyTrematodaSequence AlignmentParasitology
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No evidence for sequences structurally related to the RB1 gene in the human genome.

1991

The retinoblastoma (RB1) gene is a ubiquitously expressed gene encoding a cell-cycle control protein. Inactivation of this gene plays a crucial role in the development of retinoblastoma, osteosarcoma, and other tumors. In a search for structurally related gene sequences we identified a 5.5-kb BamHI fragment strongly cross-hybridizing with the 5′ end of the RB1 cDNA. Molecular cloning, in situ hybridization, restriction mapping, and sequence analysis identified this DNA segment as the 28S rRNA gene. The absence of other cross-hybridizing sequences suggests that the RB1 gene is not part of a structurally related gene family.

Therapeutic gene modulationGeneticsBase SequenceGenome HumanMolecular Sequence DataRestriction MappingPair-rule geneGene targetingBiologyDNA Ribosomaleye diseasesGene productBlotting SouthernGene mappingSequence Homology Nucleic AcidGene clusterRNA Ribosomal 28SGeneticsGene familyHumansGenes RetinoblastomaGenetics (clinical)Regulator geneHuman genetics
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Lysozyme gene expression and hemocyte behaviour in the Mediterranean mussel, Mytilus galloprovincialis, after injection of various bacteria or temper…

2008

The aim of the present study was to evaluate the expression of the Mytilus galloprovincialis lysozyme gene in different in vivo stress situations, including injection of bacteria Vibrio splendidus LGP32, Vibrio anguillarum or Micrococcus lysodeikticus, as well as heat shock at 30 C and cold stress at 5 C. Injection of V. splendidus LGP32 resulted in: (i) a general down-regulation of lysozyme gene expression, as quantified by Q-PCR; (ii) reduction in the number of circulating hemocytes; (iii) decrease in the percentage of circulating hemocytes expressing lysozyme mRNA which was now restricted to only small cells, as observed by ISH; and (iv) accumulation of hemocytes expressing lysozyme in t…

Vibrio anguillarumHemocytesPopulationLysozymeMytiluVibrio splendidusAquatic ScienceGene Expression Regulation EnzymologicMicrobiologyMicrococcus03 medical and health scienceschemistry.chemical_compoundISHGene expressionRNA Ribosomal 28SEnvironmental ChemistryMicrococcus lysodeikticusAnimalsVibrio anguillarumeducation030304 developmental biologyVibrioMytilus0303 health sciencesMessenger RNAeducation.field_of_studyVibrio splendidubiologyQ-PCRMusclesTemperature04 agricultural and veterinary sciencesGeneral MedicineMolluscsbiology.organism_classificationMicrococcus lysodeikticuMytilusReal-time polymerase chain reactionchemistryHeat shockQ PCR040102 fisheries0401 agriculture forestry and fisheriesMuramidaseGene expressionLysozymeBacteriaFishshellfish immunology
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Interrelationships of the Haploporinae (Digenea: Haploporidae): A molecular test of the taxonomic framework based on morphology

2009

The taxonomic framework of the Haploporidae is evaluated and the relationships within the Haploporinae are assessed for the first time at the generic level using molecular data. Partial 28S and complete ITS2 rDNA sequences from representatives of six of the nine recognised genera within the Haploporinae were analysed together with published sequences representing members of two haploporid subfamilies and of the closely related family Atractotrematidae. Molecular analyses revealed: (i) a close relationship between the Atractotrematidae and the Haploporidae; (ii) strong support for the monophyly of the Haploporinae, Dicrogaster and Saccocoelium, and the position of Ragaia within the Haplopori…

biologyZoologySequence Analysis DNATrematode InfectionsDNA Helminthbiology.organism_classificationDNA RibosomalSmegmamorphaDigeneaCladisticsEvolution MolecularFish DiseasesMonophylyInfectious DiseasesSister groupGenusDNA Ribosomal SpacerRNA Ribosomal 28SMolecular phylogeneticsAnimalsParasitologyTaxonomy (biology)TrematodaPhylogenyHaploporusParasitology International
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Molecular phylogeny of the spider family Sparassidae with focus on the genus Eusparassus and notes on the RTA-clade and ‘Laterigradae’

2013

The phylogeny of the spider family Sparassidae is comprehensively investigated using four molecular markers (mitochondrial COI and 16S; nuclear H3 and 28S). Sparassidae was recovered as monophyletic and as most basal group within the RTA-clade. The higher-level clade Dionycha was not but monophyly of RTA-clade was supported. No affiliation of Sparassidae to other members of the 'Laterigradae' (Philodromidae, Selenopidae and Thomisidae) was observed, and the crab-like posture of this group assumed a result of convergent evolution. Only Philodromidae and Selenopidae were found members of a supported clade, but together with Salticidae and Corinnidae, while Thomisidae was nested within the hig…

food.ingredientZoologySpidersSequence Analysis DNABiologybiology.organism_classificationBiological EvolutionElectron Transport Complex IVHistonesPseudomicrommataMonophylyfoodRNA Ribosomal 16SLycosoideaPolyphylyRNA Ribosomal 28SMolecular phylogeneticsGeneticsSelenopidaeAnimalsThomisidaeCladeMolecular BiologyPhylogenyEcology Evolution Behavior and SystematicsMolecular Phylogenetics and Evolution
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