Search results for " AMINO"

showing 10 items of 789 documents

Docking of indolo- and pyrrolo-pyrimidines to DNA. New DNA-interactive polycycles from amino-indoles/pyrroles and BMMA

2004

New indolo- and pyrrolo-pyrimidines of type 1-4 were studied for their ability to form stable complexes with DNA fragments. The calculated free energies of binding were found in the range -8.39 ÷ -16.72 Kcal/mol. The docking studies revealed a common binding mode with the chromophore intercalated between GC base pairs whereas the side chain lies along the minor groove.

Base pairStereochemistryOrganic ChemistryChromophoreSettore CHIM/08 - Chimica Farmaceuticalcsh:QD241-441chemistry.chemical_compoundlcsh:Organic chemistrychemistryDocking (molecular)Docking DNA interaction indolopyrimidine pyrrolopyrimidine aminoindoles aminopyrroles BMMASide chainFree energiesDNAMinor groove
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The Extracellular Vesicles of the Helminth Pathogen, Fasciola hepatica : Biogenesis Pathways and Cargo Molecules Involved in Parasite Pathogenesis

2015

Extracellular vesicles (EVs) released by parasites have important roles in establishing and maintaining infection. Analysis of the soluble and vesicular secretions of adult Fasciola hepatica has established a definitive characterisation of the total secretome of this zoonotic parasite. Fasciola secretes at least two sub-populations of EVs that differ according to size, cargo molecules and site of release from the parasite. The larger EVs are released from the specialised cells that line the parasite gastrodermus and contain the zymogen of the 37 kDa cathepsin L peptidase that performs a digestive function. The smaller exosome-like vesicle population originate from multivesicular bodies with…

Biochemistry & Molecular BiologyBIOCHEMICAL-CHARACTERIZATIONHelminth proteinHOST FIBRINOLYTIC SYSTEMPopulationSTATISTICAL-MODELBINDING PROTEINBiochemistryExosomeAnalytical ChemistryproteomicsLIVER FLUKEFasciola hepaticaParasite hostingAnimalsexosomeeducationMolecular BiologyhelminthTRICHOMONAS-VAGINALISSyncytiumeducation.field_of_studyFasciolabiologyResearchGene Expression ProfilingGene Expression Regulation DevelopmentalHelminth ProteinsIN-VITROFasciola hepaticaExtracellular vesiclesbiology.organism_classificationCell biologysecretomeCATHEPSIN L1transcriptomeLEUCINE AMINOPEPTIDASEBiogenesisSCHISTOSOMA-MANSONIMolecular & Cellular Proteomics
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Phosphorylation of serine residues is fundamental for the calcium-binding ability of Orchestin, a soluble matrix protein from crustacean calcium stor…

2003

International audience; Orchestia cavimana is a terrestrial crustacean, which cyclically stores calcium in diverticula of the midgut, in the form of calcified amorphous concretions. These concretions are associated with a proteinaceous matrix, the main constituent of the soluble matrix is Orchestin, an acidic calcium-binding protein [Testenière et al., Biochem. J. 361 (2002) 327-335]. In the present paper, we clearly demonstrate that Orchestin is phosphorylated on serine and tyrosine residues, but that calcium binding only occurs via the phosphoserine residues. To our knowledge, this is the first example of an invertebrate mineralization for which a post-translational modification is clearl…

BiomineralizationMESH: Amino Acid SequenceMESH: Calcium-Binding ProteinsMatrix (biology)01 natural sciencesBiochemistryCalcium in biologyMESH: TyrosineSerinechemistry.chemical_compoundMESH: Structure-Activity RelationshipStructural BiologyCrustaceaSerineElectrophoresis Gel Two-DimensionalMESH: AnimalsTyrosinePhosphorylation0303 health sciencesBiochemistryMESH: CalciumPhosphorylationElectrophoresis Polyacrylamide GelOrganic matrixProtein BindingMolecular Sequence DataBiophysicschemistry.chemical_elementCrustaceanCalciumBiology010402 general chemistryMESH: Calcification Physiologic03 medical and health sciencesStructure-Activity RelationshipCalcification PhysiologicMESH: CrustaceaGeneticsAnimalsMESH: Protein Binding[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyAmino Acid SequenceMESH: SerineMolecular Biology030304 developmental biologyCalcium metabolismMESH: Molecular Sequence DataMESH: PhosphorylationCalcium-Binding ProteinsCell BiologyMESH: Electrophoresis Gel Two-Dimensional0104 chemical scienceschemistryPhosphoserineMESH: Protein Processing Post-TranslationalTyrosineCalciumCalcium bindingProtein Processing Post-TranslationalMESH: Electrophoresis Polyacrylamide Gel
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Production and characterisation of recombinant forms of human pulmonary surfactant protein C (SP-C):Structure and surface activity

2006

  Udgivelsesdato: 2006-Apr Surfactant protein C (SP-C) is an essential component for the surface tension-lowering activity of the pulmonary surfactant system. It contains a valine-rich alpha helix that spans the lipid bilayer, and is one of the most hydrophobic proteins known so far. SP-C is also an essential component of various surfactant preparations of animal origin currently used to treat neonatal respiratory distress syndrome (NRDS) in preterm infants. The limited supply of this material and the risk of transmission of infectious agents and immunological reactions have prompted the development of synthetic SP-C-derived peptides or recombinant humanized SP-C for inclusion in new prepar…

BioquímicaRecombinant membrain proteinSurface PropertiesSize-exclusion chromatographyMolecular Sequence DataPhospholipidBiophysicsBiologyBiochemistrylaw.inventionchemistry.chemical_compoundAffinity chromatographyPulmonary surfactantMembranes (Biologia)lawAnimalsHumansPulmonary surfactant-associated protein CAmino Acid SequenceLipid bilayerConserved SequencePhospholipidsMammalsDrug CarriersChromatographySequence Homology Amino AcidSP-CProteïnes de membranaSurfactant protein CPulmonary surfactantCell BiologyPulmonary Surfactant-Associated Protein CRecombinant ProteinsKineticschemistryBiochemistryRecombinant DNALipid-protein interactionPeptidesSequence Alignment
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Specific expression of a TRIM-containing factor in ectoderm cells affects the skeletal morphogenetic program of the sea urchin embryo

2011

In the indirect developing sea urchin embryo, the primary mesenchyme cells (PMCs) acquire most of the positional and temporal information from the overlying ectoderm for skeletal initiation and growth. In this study, we characterize the function of the novel gene strim1, which encodes a tripartite motif-containing (TRIM) protein, that adds to the list of genes constituting the epithelial-mesenchymal signaling network. We report that strim1 is expressed in ectoderm regions adjacent to the bilateral clusters of PMCs and that its misexpression leads to severe skeletal abnormalities. Reciprocally, knock down of strim1 function abrogates PMC positioning and blocks skeletogenesis. Blastomere tran…

BlastomeresDNA Complementaryanimal structuresTRIM Sea urchin embryo Ectoderm Skeleton biomineralization Morpholino oligonucleotides Primary mesenchyme Cell migration Guidance otp pax2/5/8 sm30MesenchymeMolecular Sequence DataMorphogenesisSettore BIO/11 - Biologia MolecolareEctodermBiologyLigandsModels BiologicalBone and BonesMesodermCell MovementEctodermGene expressionmedicineAnimalsAmino Acid SequenceMolecular BiologyGeneGeneticsBone DevelopmentSequence Homology Amino AcidGene Expression Regulation DevelopmentalEmbryoBlastomereProtein Structure TertiaryCell biologyTransplantationmedicine.anatomical_structureSea Urchinsembryonic structuresCarrier ProteinsDevelopmental BiologyDevelopment
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Expression of homeobox-containing genes in the sea urchin (Parancentrotus lividus) embryo

1994

Two homeobox-containing genes that belong to different homeodomain classes have been isolated from a sea urchin geonomic library. One, PlHbox11, is the sea urchin homologue of the human and mouse Hox B3 gene, the other, PlHbox12, shows about 55% identity with paired class genes. Expression profile analysis of the two sea urchin Hbox genes suggests that they play different roles during embryogenesis. In fact, PlHbox11 transcripts are rare and are detected only in the pluteus larva and in the Aristotle's lantern and intestine of the adult. The PlHbox12 gene is, on the contrary, transiently expressed in the very early embryo already at the four cell stage; it accumulates at the 64 cell stage a…

Blastomeresanimal structuresMolecular Sequence DataSettore BIO/11 - Biologia MolecolarePlant ScienceBiologyMicebiology.animalGeneticsAnimalsHumansAmino Acid SequenceRNA MessengerCloning MolecularHox geneGeneSea urchinRegulation of gene expressionSequence Homology Amino AcidEmbryogenesisGenes HomeoboxGene Expression Regulation DevelopmentalEmbryocell specificationGeneral MedicineBlastomereSequence Analysis DNAMolecular biologyhomeodomainInsect ScienceSea Urchinsembryonic structuresHomeoboxAnimal Science and Zoologyembryogenesispaired
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The effects of alpha-cypermethrin exposure on biochemical and redox parameters in pregnant rats and their newborns

2016

IF 2.388; International audience; Pyrethroid insecticides are extensively used in agriculture and in household activities. During pregnancy, they might affect maternal metabolic status and there after fetal development. In this work, we studied metabolic and redox effects of low dose alpha-cypermethrin exposure in pregnant rats and their offspring. The diet containing alpha cypermethrin at 0.02 mg/kg/day was consumed during the entire gestation. Plasma biochemical parameters as well as liver lipid and oxidative stress markers were determined. Our results showed that alpha-cypermethrin induced an increase in body weight and in plasma glucose and lipid levels, as well as in plasma aspartate a…

Blood Glucose0301 basic medicineLipid-PeroxidationInsecticidesHealth Toxicology and Mutagenesismedicine.disease_causeCypermethrinchemistry.chemical_compoundMice0302 clinical medicinePregnancyMalondialdehydePyrethrinsMaternal-Fetal Exchange[ SDV.MHEP.PHY ] Life Sciences [q-bio]/Human health and pathology/Tissues and Organs [q-bio.TO]Alpha-cypermethrinAlanine TransaminaseGeneral Medicine030224 pathologyGlutathioneLipidsMitochondriaLiverPrenatal Exposure Delayed EffectsGestationAlkaline phosphataseFemaleChlorpyrifosOxidation-Reductionmedicine.medical_specialtyOffspringBlood sugarBiology03 medical and health sciencesProtective RoleOffspringMetabolic DiseasesInternal medicinemedicineNeurotoxicityAnimalsAspartate AminotransferasesRats WistarPesticides[ SDV.BBM ] Life Sciences [q-bio]/Biochemistry Molecular BiologyPregnancyFetusBody Weightmedicine.diseaseRatsOxidative Stress030104 developmental biologyEndocrinologyMetabolismAnimals NewbornchemistryRatAgronomy and Crop ScienceDeltamethrinFenvalerateOxidative stress
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Glutathione metabolism in type 2 diabetes and its relationship with microvascular complications and glycemia

2018

Aims/hypotheses We hypothesized that there is decreased synthesis of glutathione (GSH) in type 2 diabetes (T2DM) especially in the presence of microvascular complications, and this is dependent on the degree of hyperglycemia. Methods In this case-control study, we recruited 16 patients with T2DM (7 without and 9 with microvascular complications), and 8 age- and sex-matched non-diabetic controls. We measured GSH synthesis rate using an infusion of [2H2]-glycine as isotopic tracer and collection of blood samples for liquid chromatography mass spectrometric analysis. Results Compared to the controls, T2DM patients had lower erythrocyte GSH concentrations (0.90 ± 0.42 vs. 0.35 ± 0.30 mmol/L; P …

Blood GlucoseMale0301 basic medicinelcsh:MedicineType 2 diabetesmedicine.disease_causeBiochemistrychemistry.chemical_compoundEndocrinology0302 clinical medicineGlucose MetabolismAnimal CellsRed Blood CellsMedicine and Health SciencesDiabetes diagnosis and managementMedicineAmino Acidslcsh:ScienceMultidisciplinaryOrganic CompoundsMiddle AgedGlutathioneMass spectrometricType 2 DiabetesChemistryPhysical SciencesCarbohydrate MetabolismFemaleCellular TypesResearch ArticleAdultGlutathione metabolismmedicine.medical_specialtyHbA1cEndocrine DisordersGlycine030209 endocrinology & metabolism03 medical and health sciencesDiabetes mellitusInternal medicineMoleDiabetes MellitusHumansHemoglobinBlood Cellsbusiness.industrylcsh:ROrganic ChemistryChemical CompoundsCase-control studyBiology and Life SciencesProteinsCell BiologyGlutathionemedicine.diseaseDiagnostic medicineOxidative StressMetabolism030104 developmental biologyEndocrinologyAliphatic Amino AcidsDiabetes Mellitus Type 2chemistryMetabolic DisordersCase-Control StudiesMicrovesselslcsh:QPeptidesbusinessDiabetic AngiopathiesOxidative stressPLOS ONE
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Influence of Demographic and Lifestyle Variables on Plasma Magnesium Concentrations and Their Associations with Cardiovascular Risk Factors in a Medi…

2020

Several studies have shown that a low magnesium (Mg) intake in the diet is associated with greater cardiovascular risk and greater risk of diabetes. However, the results are not consistent in all populations. To minimize the biases derived from diet measurement, more objective biomarkers of magnesium status have been proposed. Although there is still no ideal biomarker for Mg, several studies have shown that plasma Mg concentrations could be a relatively acceptable biomarker for cardiovascular risk assessment. However, further studies are required to better characterize this marker in different populations. Our aim was to analyze the association between plasma Mg concentrations (measured th…

Blood GlucoseMaleMediterranean dietPhysiologyBlood Pressure030204 cardiovascular system & hematologymagnesiumDiet MediterraneanBody Mass Indexchemistry.chemical_compound0302 clinical medicineAged 80 and overeducation.field_of_studyNutrition and DieteticsdiabetesMediterranean RegionAge FactorsMiddle AgedLipidsQuartileCardiovascular DiseasesCreatinineFemaleWaist Circumferencemediterranean populationlcsh:Nutrition. Foods and food supplyAdultAdolescentPopulationNutritional Status030209 endocrinology & metabolismlcsh:TX341-641Risk AssessmentArticleWhite PeopleHypomagnesemia03 medical and health sciencesYoung AdultSex FactorsDiabetes mellitusmedicineTobacco SmokingHumansAspartate AminotransferaseseducationLife StyleAgedCholesterolbusiness.industrycholesterolmediterranean dietmedicine.diseaseObesityUric AcidCross-Sectional StudieschemistryDiabetes Mellitus Type 2Heart Disease Risk FactorsSpainCase-Control StudiesUric acidbusinessFood Science
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Branched-Chain and Aromatic Amino Acids Are Associated With Insulin Resistance During Pubertal Development in Girls.

2018

Cross-sectional studies in children show branched-chain and aromatic amino acids are associated with insulin resistance, but whether these associations persist from childhood to adulthood is not known. This study aimed to assess whether circulating amino acids associate with insulin resistance during pubertal development.This was a 7.5-year longitudinal study from childhood to early adulthood. A total of 396 nondiabetic Finnish girls aged 11.2 ± .8 years at baseline participated in the study which was conducted at the Health Science Laboratory, University of Jyväskylä. Serum concentrations of glucose and insulin were determined by enzymatic photometric methods and amino acids by nuclear mag…

Blood Glucosemedicine.medical_specialtyLongitudinal studyAdolescentmedicine.medical_treatmentBody Mass Index03 medical and health scienceschemistry.chemical_compoundAmino Acids Aromatic0302 clinical medicineInsulin resistance030225 pediatricsInternal medicineHyperinsulinemiaAromatic amino acidsMedicineHumansInsulin030212 general & internal medicineLongitudinal StudiesChildchemistry.chemical_classificationMenarchebusiness.industryInsulinPublic Health Environmental and Occupational Healthmedicine.diseaseAmino acidPsychiatry and Mental healthEndocrinologychemistryPediatrics Perinatology and Child HealthMenarcheHomeostatic model assessmentFemaleInsulin ResistancebusinessAmino Acids Branched-ChainThe Journal of adolescent health : official publication of the Society for Adolescent Medicine
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