Search results for " Botany"

showing 10 items of 1545 documents

Fungal proteins in the extra-radical phase of arbuscular mycorrhiza: a shotgun proteomic picture

2009

International audience

Proteomics0106 biological sciencesPhysiologyGLOMUS INTRARADICESARBUSCULAR MYCORRHIZAShotgunPlant Science01 natural sciencesMass SpectrometryFungal Proteins03 medical and health sciencesSequence Analysis ProteinMycorrhizaeGlomus intraradicesBotanyDAUCUS CAROTAComputingMilieux_MISCELLANEOUS030304 developmental biologyROOT SYMBIOSIS0303 health sciencesFungal proteinMyceliumbiologyMASCOTFungiMYCORRHIZEbiology.organism_classificationPROTEOME[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyArbuscular mycorrhizaProteomeChromatography Liquid010606 plant biology & botanyDaucus carota
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Proteomics as a tool to monitor plant-microbe endosymbioses in the rhizosphere

2004

In recent years, outstanding molecular approaches have been used to investigate genes and functions involved in plant-microbe endosymbioses. In this review, we outline the use of proteomic analysis, based on two-dimensional electrophoresis and mass spectrometry, to characterize symbiosis-related proteins. During the last decade, proteomics succeeded in identifying about 400 proteins associated with the development and functioning of both mycorrhizal and rhizobial symbioses. Further progress in prefractionation procedures is expected to allow the detection of symbiotic proteins showing low abundance or being present in certain cell compartments.

Proteomics0106 biological sciencesPlant ScienceComputational biologyBiologyProteomicsPlant Roots01 natural sciencesMass SpectrometryFungal Proteins03 medical and health sciencesTwo dimensional electrophoresisMycorrhizaeBotanyGeneticsSymbiosisMolecular BiologySoil MicrobiologyEcology Evolution Behavior and Systematics[SDV.MP.MYC]Life Sciences [q-bio]/Microbiology and Parasitology/MycologyComputingMilieux_MISCELLANEOUSPlant Proteins030304 developmental biology0303 health sciencesRhizospherePlant microbeGeneral Medicine[SDV.MP.MYC] Life Sciences [q-bio]/Microbiology and Parasitology/MycologyInvestigation methods010606 plant biology & botany
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Sub-cellular proteomic analysis of a Medicago truncatula root microsomal fraction

2004

Since the last decade, Medicago truncatula has emerged as one of the model plants particularly investigated in the field of plant-microbe interactions. Several genetic and molecular approaches including proteomics have been developed to increase knowledge about this plant species. To complement the proteomic data, which have mainly focused on the total root proteins from M. truncatula, we carried out a sub-cellular approach to gain access to the total membrane-associated proteins. Following the setting up of the purification process, microsomal proteins were separated on 2-DE. Ninety-six out of the 440 well-resolved proteins were identified by MALDI-TOF peptide mass fingerprinting. A high p…

Proteomics0106 biological sciencesPlant ScienceFractionationHorticultureBiologyProteomicsPeptide MappingPlant Roots01 natural sciencesBiochemistry03 medical and health sciencesSymbiosisPeptide mass fingerprintingBotanyMedicagoElectrophoresis Gel Two-DimensionalSymbiosisMolecular Biology[SDV.BV.PEP] Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyComputingMilieux_MISCELLANEOUSPlant Proteins030304 developmental biology2. Zero hunger0303 health sciencesfungifood and beveragesGeneral Medicinebiology.organism_classificationMedicago truncatula[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyBiochemistryMicrosomePlant speciesProtein identification010606 plant biology & botanyPhytochemistry
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A proteomic approach to studying plant response to crenate broomrape (Orobanche crenata) in pea (Pisum sativum)

2004

Abstract Crenate broomrape ( Orobanche crenata ) is a parasitic plant that threatens legume production in Mediterranean areas. Pea ( Pisum sativum ) is severely affected, and only moderate levels of genetic resistance have so far been identified. In the present work we selected the most resistant accession available (Ps 624) and compared it with a susceptible (Messire) cultivar. Experiments were performed by using pot and Petri dish bioassays, showing little differences in the percentage of broomrape seed germination induced by both genotypes, but a significant hamper in the number of successfully installed tubercles and their developmental stage in the Ps 624 compared to Messire. The prote…

Proteomics0106 biological sciencesSilver StainingGenotypeParasitic plantNitrogen assimilationGene ExpressionPlant ScienceHorticultureOrobanche crenataPeptide MappingPlant Roots01 natural sciencesBiochemistryFructokinasePisum03 medical and health sciencesSativumGlutamine synthetaseElectrophoresis Gel Two-DimensionalDatabases ProteinMolecular Biology[SDV.BV.PEP] Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyComputingMilieux_MISCELLANEOUSPlant Proteins030304 developmental biologyPathogenesis-related protein2. Zero hunger0303 health sciencesbiologyOrobanchePeasGeneral Medicinebiology.organism_classification[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyBiochemistrySpectrometry Mass Matrix-Assisted Laser Desorption-IonizationElectrophoresis Polyacrylamide Gel010606 plant biology & botany
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The era of reference genomes in conservation genomics

2022

Progress in genome sequencing now enables the large-scale generation of reference genomes. Various international initiatives aim to generate reference genomes representing global biodiversity. These genomes provide unique insights into genomic diversity and architecture, thereby enabling comprehensive analyses of population and functional genomics, and are expected to revolutionize conservation genomics.

QH301 Biology580 Plants (Botany)Genetics -- ResearchEvolutionsbiologibiodiversity conservation; conservation genetics; ERGA; European Reference Genome AtlasConservation genetics; Biodiversity conservation; European Reference Genome Atlas; ERGAAnimal genome mappingudc:630*1GenomeGEERGA[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE][SDE.BE.BIOD]Environmental Sciences/Biodiversity and Ecology/domain_sde.be.biodERGA ; Biodiversity [MeSH] ; Genomics [MeSH] ; Ecology Evolution Behavior and Systematics ; conservation genetics ; Genome [MeSH] ; biodiversity conservation ; European Reference Genome Atlas3rd-DASGenomicsBiodiversityreferenčni genomi[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM][SDE.BE.BEC]Environmental Sciences/Biodiversity and Ecology/domain_sde.be.becChemistry10121 Department of Systematic and Evolutionary BotanygenomikaGE Environmental Sciences:Informàtica::Aplicacions de la informàtica::Bioinformàtica [Àrees temàtiques de la UPC]biodiverzitetaSettore BIO/18 - GENETICAeducationQH426 GeneticsQH301European Reference Genome AtlasVDP::Matematikk og Naturvitenskap: 400::Basale biofag: 470[SDE.BE.EVO]Environmental Sciences/Biodiversity and Ecology/domain_sde.be.evoGeneticsconservation genetics ; biodiversity conservation ; European Reference Genome Atlas ; ERGAgenomi10211 Zurich-Basel Plant Science CenterGenomesGenetikBiologyQH426Ecology Evolution Behavior and SystematicsEvolutionary BiologyBiodiversity conservation; Conservation genetics; European Reference Genome AtlasAmbientaleEcologíaGenética1105 Ecology Evolution Behavior and Systematicsconservation geneticsWildlife conservation570 Life sciences; biologyHuman medicinebiodiversity conservationAnimal genetics[SDE.BE]Environmental Sciences/Biodiversity and EcologyGenètica
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New national and regional bryophyte records, 65

2021

Pseudoamblystegium subtile (Hedw.) Vanderp. & Hedenäs. CONTRIBUTORS: R. Gabriel, M. Kubová, C. Sérgio and I. Soares Albergaria. PORTUGAL, AZORES: Terceira Island, Angra do Heroísmo, municipal garden ‘Jardim Duque da Terceira’, 38° 39′ 24.0′′N, 27°13′ 05.99′′W, 31 m a.s.l, on the base of a shrub, in acidic conditions, 7 April 2017, leg. Michaela Kubová s.n. (AZU). A new understanding of the pleurocarpous moss species Pseudoamblystegium subtile was proposed by Vanderpoorten and Hedenäs (2009). The new genus is separated from the other Amblystegiaceae primarily due to its phylogenetic consistency and is characterised by the possession of leaves with a very short nerve, and erect capsules (Vand…

Riccia rhenana liverworts bryophytes Croatia0106 biological sciencesPseudoamblystegium subtile (Hedw.)business.industry[SDV]Life Sciences [q-bio]Aneura maximaBryophytesCoal miningForestryPlant Science15. Life on land010603 evolutionary biology01 natural sciencesGeographyBryophytebusinessAzoresComputingMilieux_MISCELLANEOUSEcology Evolution Behavior and Systematics010606 plant biology & botanyJournal of Bryology
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Plant phenology and genetic variability in root and nodule development strongly influence genetic structuring of Rhizobium leguminosarum biovar vicia…

2008

Publication Inra prise en compte dans l'analyse bibliométrique des publications scientifiques mondiales sur les Fruits, les Légumes et la Pomme de terre. Période 2000-2012. http://prodinra.inra.fr/record/256699; International audience; The symbiotic relationships between legumes and their nitrogen (N-2)-fixing bacterial partners (rhizobia) vary in effectiveness to promote plant growth according to both bacterial and legume genotype. To assess the selective effect of host plant on its microsymbionts, the influence of the pea (Pisum sativum) genotype on the relative nodulation success of Rhizobium leguminosarum biovar viciae (Rlv) genotypes from the soil populations during plant development h…

SELECTION0106 biological sciencesGENETIC VARIABILITYGenotypePhysiologyPlant Science01 natural sciencesRHIZOBIUM LEGUMINOSARUM BIOVAR VICIAERhizobia03 medical and health sciencesSativumSymbiosisGenotypeBotanyDNA Ribosomal SpacerGenetic variabilitySymbiosisLegumePhylogenySoil Microbiology2. Zero hunger0303 health sciencesRhizosphereRhizobium leguminosarumbiology030306 microbiologyPeasfood and beveragesbiology.organism_classification[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyGenetic structureMutationNODDRoot Nodules PlantSequence Alignment010606 plant biology & botanyThe New phytologistReferences
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Connecting the data landscape of long-term ecological studies: the SPI-Birds data hub

2021

The integration and synthesis of the data in different areas of science is drastically slowed and hindered by a lack of standards and networking programmes. Long-term studies of individually marked animals are not an exception. These studies are especially important as instrumental for understanding evolutionary and eco-logical processes in the wild. Furthermore, their number and global distribution provides a unique opportunity to assess the generality of patterns and to address broad-scale global issues (e.g. climate change).

SELECTION0106 biological sciencesZOOLOGIADatabases Factual05 Environmental Sciences:Zoology and botany: 480 [VDP]Research network01 natural scienceslong‐term studiesBehavioral EcologyData standardsmeta‐data standardsData hubComputingMilieux_MISCELLANEOUSResearch Articlesmeta‐PERSONALITYCLIMATE-CHANGEEcologyEnvironmental resource managementALTERmeta&#8208birds data standards database FAIR data long-term studies meta-data standards research networkPE&RCGedragsecologieChemistryGeographyinternational[SDE]Environmental Sciences1181 Ecology evolutionary biologyPOPULATIONSPlan_S-Compliant_OALife Sciences & Biomedicinelong‐Research ArticleCLUTCH-SIZELong-term studiesEnvironmental Sciences & EcologyAnimal Breeding and GenomicsZoologi15.- Proteger restaurar y promover la utilización sostenible de los ecosistemas terrestres gestionar de manera sostenible los bosques combatir la desertificación y detener y revertir la degradación de la tierra y frenar la pérdida de diversidad biológica010603 evolutionary biologyBirdsDatabase07 Agricultural and Veterinary Sciencesddc:570VDP::Mathematics and natural scienses: 400::Zoology and botany: 480AnimalsFokkerij en Genomica:Zoologiske og botaniske fag: 480 [VDP]BiologyEcology Evolution Behavior and SystematicsMeta-data standardsMetadataFAIR dataScience & Technologylong&#8208business.industry010604 marine biology & hydrobiology06 Biological Sciences15. Life on landdatabase ; meta-data standards ; long-term studies ; birds ; data standards ; FAIR data ; research networkEVOLUTIONTerm (time)13. Climate actionResearch councilVDP::Matematikk og naturvitenskap: 400::Zoologiske og botaniske fag: 480Animal Science and Zoologyterm studiesGREAT TITSbusinessZoologybirds ; data standards ; database ; FAIR data ; long-term studies ; meta-data standards ; research networkRESPONSES
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Assessing Effects of Temperature Change on Four Limonium Species from Threatened Mediterranean Salt-Affected Habitats

2018

[EN] Evaluation of tolerance to temperatures in the germination stage is an important tool to foresee the possible effect of global warming. Moreover, establishing germination protocols for endemic and threatened species is most interesting for restoration and management plans that focus on habitat conservation. Seed germination was analysed in four species of the genus Limonium (L. virgatum, L. narbonense, L. girardianum and L. santapolense) growing in two saline habitats on the eastern coast of the Iberian Peninsula. The study aim was to compare responses of seed germination to different temperature regimes. Seeds were collected in two protected areas, `L¿Albufera de Valencia¿ (province o…

Salt marshes0106 biological sciencesMediterranean climateLimoniumRange (biology)BOTANICASoil characteristicsPlant ScienceHorticulture01 natural sciencesHalophytesHalophyteBotanyEndemismbiologyEndemicsEDAFOLOGIA Y QUIMICA AGRICOLA04 agricultural and veterinary sciencesSeed germinationbiology.organism_classificationHorticultureHabitatGerminationThreatened species040103 agronomy & agriculture0401 agriculture forestry and fisheriesAgronomy and Crop Science010606 plant biology & botanyNotulae Botanicae Horti Agrobotanici Cluj-Napoca
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Preliminary evaluation of sixPrunusrootstocks for peach in Italy

2018

In Italy, the evaluation of rootstocks is supported by the Ministry of Agriculture and carried out in a network of trials along the Country. This study evaluated growth and yield performance of ‘Big Top’ nectarine and ‘Rome Star’ peach grafted on six rootstocks of different origin and vigor, namely GF677 (the most widespread in Italy), Garnem, Adesoto, RootPac®20, RootPac®40, and RootPac®90, in three different locations, Castelvetrano (Sicily), Forlì and Cesena (Emilia-Romagna). Yield, number of fruits, trunk cross-sectional area (TCSA), average fruit weight, flesh firmness, soluble solids content (SSC) and titratable acidity (TA) were determined at the third leaf (2015). In all sites, tree…

Settore AGR/03 - Arboricoltura Generale E Coltivazioni Arboree0106 biological sciencesFruit qualityTrunk cross-sectional areaHarvest dateTree vigorHorticultureBiology010603 evolutionary biology01 natural sciencesSoluble solidHarvest date fruit quality soluble solids tree vigor trunk cross-sectional area010606 plant biology & botanyActa Horticulturae
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