Search results for " DNA"

showing 10 items of 2475 documents

An annotated checklist of bryophytes of Europe, Macaronesia and Cyprus

2020

Introduction. Following on from work on the European bryophyte Red List, the taxonomically and nomenclaturally updated spreadsheets used for that project have been expanded into a new checklist for the bryophytes of Europe. Methods. A steering group of ten European bryologists was convened, and over the course of a year, the spreadsheets were compared with previous European checklists, and all changes noted. Recent literature was searched extensively. A taxonomic system was agreed, and the advice and expertise of many European bryologists sought. Key results. A new European checklist of bryophytes, comprising hornworts, liverworts and mosses, is presented. Fifteen new combinations are propo…

0106 biological sciencesSYSTEMATIC POSITIONLibrary sciencePlant Science010603 evolutionary biology01 natural sciencesmosseshornwortsGENUS RICCIA MARCHANTIALESPHYLOGENETIC-RELATIONSHIPSIUCN Red ListInternal transcribed spacerSP-NOV ORTHOTRICHACEAEEcology Evolution Behavior and SystematicsCHLOROPLAST DNA-SEQUENCESBryophytesIBERIAN PENINSULAChecklistliverwortsEuropeINTERNAL TRANSCRIBED SPACERGeographyWork (electrical)1181 Ecology evolutionary biologyMOSS FAMILY BRYACEAEMORPHOLOGICAL EVOLUTIONBryophytechecklist010606 plant biology & botanyTAXONOMIC REVISION
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A Mediterranean Monk Seal Pup on the Apulia coast (Southern Italy): sign of an ongoing recolonisation?

2020

The Mediterranean monk seal (Monachus monachus) is one of the most endangered marine mammals in the world. This species has been threatened since ancient times by human activities and currently amounts to approximately 700 individuals distributed in the Eastern Mediterranean Sea (Aegean and Ionian Sea) and Eastern Atlantic Ocean (Cabo Blanco and Madeira). In other areas, where the species is considered “probably extinct”, an increase in sporadic sightings has been recorded during recent years. Sightings and accidental catches of Mediterranean monk seals have become more frequent in the Adriatic Sea, mainly in Croatia but also along the coasts of Montenegro, Albania and Southern Italy. A Med…

0106 biological sciencesSeal (emblem)Mediterranean climateAdriatic SeaEndangered speciesSettore BIO/05 - ZoologiaMonachus monachusmitochondrial DNA010603 evolutionary biology01 natural sciencesMediterranean monk sealMonachus monachuGreek islandMontenegrolcsh:QH301-705.5Nature and Landscape Conservation<i>Monachus monachus</i>Ecologybiology010604 marine biology & hydrobiologyEcological Modelingendangered speciesbiology.organism_classificationAgricultural and Biological Sciences (miscellaneous)FisheryGeographylcsh:Biology (General)Threatened speciesIonian island
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Molecular Phylogeny of Tintinnid Ciliates (Tintinnida, Ciliophora)

2012

We investigated the phylogeny of tintinnids (Ciliophora, Tintinnida) with 62 new SSU-rDNA sequences from single cells of 32 marine and freshwater species in 20 genera, including the first SSU-rDNA sequences for Amphorides, Climacocylis, Codonaria, Cyttarocylis, Parundella, Petalotricha, Undella and Xystonella, and 23 ITS sequences of 17 species in 15 genera. SSU-rDNA phylogenies suggested a basal position for Eutintinnus, distant to other Tintinnidae. We propose Eutintinnidae fam. nov. for this divergent genus, keeping the family Tintinnidae for Amphorellopsis, Amphorides and Steenstrupiella. Tintinnopsis species branched in at least two separate groups and, unexpectedly, Climacocylis branc…

0106 biological sciencesSequence analysisMolecular Sequence DataZoologyBiology010603 evolutionary biology01 natural sciencesMicrobiologyDNA Ribosomal03 medical and health sciencesPhylogeneticsGenusDNA Ribosomal SpacerRNA Ribosomal 18SCluster Analysis14. Life underwaterCiliophoraCladeSensu strictoPhylogeny[SDU.STU.OC]Sciences of the Universe [physics]/Earth Sciences/Oceanography030304 developmental biology0303 health sciencesEcologyWaterGenes rRNASequence Analysis DNARibosomal RNADNA Protozoanbiology.organism_classificationMolecular phylogeneticsRNA ProtozoanTintinnid
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Genetic admixture despite ecological segregation in a North African sparrow hybrid zone (Aves, Passeriformes, Passer domesticus × Passer hispaniolens…

2019

Under different environmental conditions, hybridization between the same species might result in different patterns of genetic admixture. Particularly, species pairs with large distribution ranges and long evolutionary history may have experienced several independent hybridization events over time in different zones of overlap. In birds, the diverse hybrid populations of the house sparrow (Passer domesticus) and the Spanish sparrow (Passer hispaniolensis) provide a striking example. Throughout their range of sympatry, these two species do not regularly interbreed; however, a stabilized hybrid form (Passer italiae) exists on the Italian Peninsula and on several Mediterranean islands. The spa…

0106 biological sciencesSympatrymicrosatelliteBiologíaPopulationintrogressionMICROSATELLITESZoologyGenetic admixturemitochondrial DNAZ-chromosome010603 evolutionary biology01 natural sciencesmicrosatellites//purl.org/becyt/ford/1 [https]Ciencias Biológicas03 medical and health sciencesHybrid zonelcsh:QH540-549.5biology.animalZ-CHROMOSOMEItalian sparroweducation//purl.org/becyt/ford/1.6 [https]hybridizationEcology Evolution Behavior and Systematics030304 developmental biologyNature and Landscape ConservationSpanish sparrow0303 health scienceseducation.field_of_studySparrowEcologybiologyINTROGRESSION15. Life on landbiology.organism_classificationlcsh:EcologyMITOCHONDRIAL DNAPasserZ‐chromosomeHYBRIDIZATIONCIENCIAS NATURALES Y EXACTAS
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Rodents and palaeogenetics: new perspectives.

2008

10 pages; Rodents are the most diversified mammalian order (484 extant genera including 2277 species), and they have a worldwide distribution. Palaeontological, morphological and molecular data have greatly helped to resolve their systematics and evolutionary history. However, some discrepancies remain between palaeontologists and molecular biologists. New techniques in molecular biology, and especially in palaeogenetics, allow us to have direct access to the hereditary material of extinct organisms, and they can compensate for some morphological limits. Unfortunately, few studies are dealing with rodent palaeogenetics, despite the amount of museum and fossil material available. Here, we re…

0106 biological sciencesSystematicsZoologyBiology[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy010603 evolutionary biology01 natural sciencesRodentsGenetic diversity03 medical and health sciencesExtant taxonPhylogeneticsPalaeoparasitologyPhylogeny030304 developmental biology[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/Paleontology0303 health sciences[ SDE.BE ] Environmental Sciences/Biodiversity and Ecology[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]Ancient DNAPhylochronologyGeneral EngineeringPaleogenetics[ SDV.GEN.GPO ] Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]Ancient DNA[SDE.BE]Environmental Sciences/Biodiversity and Ecology[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/Paleontology[ SDV.BID.SPT ] Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy
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An account on the taxonomy and molecular diversity of a marine rock-pool dweller, Tigriopus fulvus (Copepoda, Harpacticoida)

2019

[ES] El género de copépodos Tigriopus Norman, 1869 se distribuye en todo el mundo en charcas de rocas costeras y se considera que actualmente incluye 14 especies válidas. Tigriopus fulvus (Fischer 1860), con sus subespecies Tigriopus fulvus adriaticus Van Douwe 1913 y Tigriopus fulvus algiricus Monard 1935, y Tigriopus minutus Bozic 1960 han sido descritos para el área del Mediterráneo, pero la diversidad real del género es desconocida actualmente. El objetivo de este estudio fue evaluar la identidad real de las poblaciones mediterráneas de Tigriopus y dilucidar su taxonomía y patrón de diversidad genética. Con este fin, se secuenció un fragmento del gen de ADN mitocondrial (citocromo c oxi…

0106 biological sciencesTigriopusZOOLOGIATaxonomía basada en ADNSettore BIO/05 - ZoologiaZoologyMonopolización periódicaAquatic ScienceSubspecies01 natural sciencesHarpacticoidaDNA taxonomyTECNOLOGIA DEL MEDIO AMBIENTEgeographyGenetic diversitygeography.geographical_feature_categorybiologyGenetic structuring010604 marine biology & hydrobiologyCytochrome c oxidase subunit Igenetic structuring clockwork monopolization rocky shore communities cryptic species DNA taxonomyComunidades de costas rocosasbiology.organism_classificationEstructuración genéticaRocky shore communitiesGenetic structureCryptic speciesClockwork monopolizationTaxonomy (biology)Especies crípticasestructuración genética monopolización periódica comunidades de costas rocosas especies crípticas taxonomía basada en ADNTide pool
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Molecular phylogeny of the extinct giant deer, Megaloceros giganteus.

2006

a Centre de Genetique Moleculaire et Cellulaire (CGMC), CNRS UMR 5534, Universite Claude Bernard Lyon 1, Villeurbanne, France b Laboratoire d’Anthropologie des Populations du Passe, CNRS UMR 5199 PACEA, Universite Bordeaux 1, Talence, France c UCD School of Biology and Environmental Science, UCD, BelWeld, Dublin 4, Ireland d Laboratoire d’Ecologie des Hydrosystemes Fluviaux, CNRS UMR 5023, Universite Claude Bernard Lyon 1, Villeurbanne, France e Biogeosciences-Dijon, CNRS UMR 5561, Universite de Bourgogne, Centre des Sciences de la Terre, Dijon, France f Department of Palaeontology, Royal Belgian Institute of Natural Sciences, Brussels, Belgium g Department of Biology, University College Lo…

0106 biological sciencesTime FactorsMESH: GeographyMESH: Base Sequence[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy01 natural sciencesMESH: FossilsMESH : BiodiversityMESH: AnimalsMESH: PhylogenyGiant deerPhylogenyComputingMilieux_MISCELLANEOUS[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/Paleontology0303 health sciencesbiologyAncient DNAGeographyEcologymtDNAFossils[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]MegalocerosMESH : GeographyClaude bernardBiodiversityMESH : Deer[ SDV.GEN.GPO ] Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE][SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologyMESH : Time Factors[SDV.OT]Life Sciences [q-bio]/Other [q-bio.OT]MESH: Deer010603 evolutionary biologyMESH: BiodiversityQuaternary03 medical and health sciencesGeneticsAnimals14. Life underwaterMolecular BiologyEcology Evolution Behavior and Systematics030304 developmental biologyBase SequenceDeerMESH: Time FactorsMESH : Phylogenybiology.organism_classificationMESH : FossilsMESH : Base SequenceMESH : AnimalsHumanities[ SDV.BID.SPT ] Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy
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The plasma membrane oxidase NtrbohD is responsible for AOS production in elicited tobacco cells

2002

Summary A cDNA encoding a protein, NtrbohD, located on the plasma membrane and homologue to the flavocytochrome of the neutrophil NADPH oxidase, was cloned in tobacco. The corresponding mRNA was accumulated when tobacco leaves and cells were treated with the fungal elicitor cryptogein. After elicitation with cryptogein, tobacco cells transformed with antisense constructs of NtrbohD showed the same extracellular alkalinization as the control, but no longer produced active oxygen species (AOS). This work represents the first demonstration of the function of a homologue of gp91–phox in AOS production in elicited tobacco cells.

0106 biological sciencesTime FactorsNicotiana tabacumMolecular Sequence DataPlant ScienceBiologyGenes Plant01 natural sciencesFungal Proteins[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health sciences[SDV.GEN.GPL] Life Sciences [q-bio]/Genetics/Plants geneticsComplementary DNATobaccoGene expressionGeneticsExtracellularAOSAmino Acid SequenceRNA MessengerCells CulturedComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesOxidase testNADPH oxidaseGene Expression ProfilingAlgal ProteinsCell MembraneHydrogen PeroxideCell BiologyHydrogen-Ion ConcentrationPlants Genetically Modifiedbiology.organism_classification3. Good healthElicitorCell biologyPlant LeavesProtein TransportBiochemistryCell culturebiology.proteinOxidoreductasesReactive Oxygen Species010606 plant biology & botany
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New insight into the colonization processes of common voles: inferences from molecular and fossil evidence.

2008

Biologie et Gestion des Populations, Campus International de Baillarguet, Montferrier/Lez, FranceElucidating the colonization processes associated with Quaternary climatic cycles is important in order to understand the distribution of biodiversity and the evolutionary potential of temperate plant and animal species. In Europe, general evolutionary scenarios have been defined from genetic evidence. Recently, these scenarios have been challenged with genetic as well as fossil data. The origins of the modern distributions of most temperate plant and animal species could predate the Last Glacial Maximum. The glacial survival of such populations may have occurred in either southern (Mediterranea…

0106 biological sciences[ SDE.BE.BIOD ] Environmental Sciences/Biodiversity and Ecology/domain_sde.be.biodBiodiversitylcsh:Medicine[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy01 natural sciencesbiodiversitéEvolutionary Biology/Animal GeneticsMaximum-LikelihoodControl RegionGlacial periodévolutionlcsh:SciencePhylogenyévolution biologiqueMismatch Distributionchangement climatique0303 health sciencesMultidisciplinarybiologyArvicolinaeFossilsEcology[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]mammifèreFossil RecordCytochromes bEuropePhylogeographyHabitatResearch ArticleEvolutionary Biology/PaleontologyGene FlowClimatic ChangesGenetic SpeciationcolonisationMolecular DatingCytochrome b010603 evolutionary biologyQuaternary03 medical and health sciencesAnimalsMicrotusDemography030304 developmental biologyBayesian ApproachEvolutionary Biology/Evolutionary and Comparative GeneticsrongeurHuman evolutionary geneticslcsh:RGenetic Variation[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biologySequence Analysis DNAmicrotus arvalis15. Life on landbiology.organism_classificationBiogeographic TraitsPhylogeographyGenetic SpeciationBiological dispersalAnimal Migrationlcsh:QCommon Vole
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Arabidopsis thaliana nicotianamine synthase 4 is required for proper response to iron deficiency and to cadmium exposure.

2013

International audience; The nicotianamine synthase (NAS) enzymes catalyze the formation of nicotianamine (NA), a non-proteinogenic amino acid involved in iron homeostasis. We undertook the functional characterization of AtNAS4, the fourth member of the Arabidopsis thaliana NAS gene family. A mutant carrying a T-DNA insertion in AtNAS4 (atnas4), as well as lines overexpressing AtNAS4 both in the atnas4 and the wild-type genetic backgrounds, were used to decipher the role of AtNAS4 in NA synthesis, iron homeostasis and the plant response to iron deficiency or cadmium supply. We showed that AtNAS4 is an important source for NA. Whereas atnas4 had normal growth in iron-sufficient medium, it dis…

0106 biological sciences[ SDV.BV ] Life Sciences [q-bio]/Vegetal BiologyMESH : Azetidinecarboxylic AcidFMN ReductaseArabidopsis thalianaMutantArabidopsisGene ExpressionPlant Science01 natural sciencesMESH : Cation Transport ProteinsMESH : IronMESH : Arabidopsis ProteinsNicotianamine synthaseMESH : Plants Genetically Modifiedchemistry.chemical_compoundMESH : ArabidopsisGene Expression Regulation PlantGene expressionMESH: Genes PlantArabidopsis thalianaMESH : DNA BacterialHomeostasisMESH: ArabidopsisNicotianamineMESH: Stress PhysiologicalCation Transport ProteinsMESH : Adaptation PhysiologicalMESH : Cadmium2. Zero hungerchemistry.chemical_classification0303 health sciencesCadmiumMESH: IronbiologyGeneral MedicineIron DeficienciesPlants Genetically ModifiedAdaptation PhysiologicalMESH: Azetidinecarboxylic AcidMESH : PhenotypePhenotypeBiochemistryMESH: HomeostasisMESH : HomeostasisMESH : MutationAzetidinecarboxylic AcidCadmiumDNA BacterialMESH: Gene ExpressionMESH: MutationIronMESH: Cadmiumchemistry.chemical_elementMESH: FerritinsMESH: Arabidopsis ProteinsMESH: Alkyl and Aryl TransferasesGenes PlantMESH: PhenotypeNicotianamine synthase03 medical and health sciencesMESH: Cation Transport ProteinsStress PhysiologicalIron homeostasisGenetics[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyIron deficiency (plant disorder)MESH: Gene Expression Regulation PlantMESH : Genes PlantMESH : Alkyl and Aryl TransferasesMESH : Stress Physiological030304 developmental biologyMESH : FMN ReductaseAlkyl and Aryl TransferasesArabidopsis ProteinsIron deficiencyNitric oxideNicotianaminebiology.organism_classificationMESH: Adaptation PhysiologicalMESH: DNA BacterialMESH : Gene ExpressionEnzymechemistryMESH: FMN ReductaseMESH: Plants Genetically ModifiedFerritinsMutationbiology.proteinMESH : FerritinsAgronomy and Crop ScienceMESH : Gene Expression Regulation Plant010606 plant biology & botany
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