Search results for " DOM"

showing 10 items of 2750 documents

Diversifying selection on MHC class I in the house sparrow (Passer domesticus).

2009

10 pages; International audience; Genes of the major histocompatibility complex (MHC) are the most polymorphic loci known in vertebrates. Two main hypotheses have been put forward to explain the maintenance of MHC diversity: pathogen-mediated selection and MHC-based mate choice. Host-parasite interactions can maintain MHC diversity via frequency-dependent selection, heterozygote advantage, and diversifying selection (spatially and/or temporally heterogeneous selection). In this study, we wished to investigate the nature of selection acting on the MHC class I across spatially structured populations of house sparrows (Passer domesticus) in France. To infer the nature of the selection, we comp…

0106 biological sciencesMESH : Gene FlowMESH: Selection (Genetics)MESH: GeographyGenes MHC Class IMESH: Genetic MarkersBalancing selectionMESH : Microsatellite Repeats[ SDV.IMM.IA ] Life Sciences [q-bio]/Immunology/Adaptive immunology01 natural sciencesmicrosatellitesMESH: SparrowsMESH : Genetic MarkersMESH: AnimalsMESH: Genetic VariationMESH: Evolution MolecularGenetics0303 health scienceseducation.field_of_studyGeographybiology[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]MESH : GeographyMESH: Genes MHC Class I[ SDE.MCG ] Environmental Sciences/Global Changes[ SDV.BID.EVO ] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE][SDV.IMM.IA]Life Sciences [q-bio]/Immunology/Adaptive immunologyMate choiceMESH: Stochastic ProcessesMHC class IMESH : MutationSparrowsGene FlowGenetic MarkersMESH: Mutationbalancing selection[SDE.MCG]Environmental Sciences/Global ChangesPopulationMESH : Genetic DriftMESH: Genetics Populationchemical and pharmacologic phenomenaMESH : Stochastic ProcessesMajor histocompatibility complex010603 evolutionary biologyMESH : Genes MHC Class IEvolution Molecular03 medical and health sciencesMESH : Genetic VariationMHC class IGeneticsPasser domesticusMESH : Selection (Genetics)AnimalsMESH : Evolution MolecularSelection GeneticMESH: Genetic DrifteducationAllelesMESH: Gene FlowEcology Evolution Behavior and SystematicsSelection (genetic algorithm)030304 developmental biologyLocal adaptationIsolation by distanceStochastic Processes[ SDE.BE ] Environmental Sciences/Biodiversity and Ecologyhouse sparrowMESH: AllelesGenetic DriftGenetic Variationdiversifying selectionPasser domesticus.[ SDV.GEN.GA ] Life Sciences [q-bio]/Genetics/Animal geneticsMESH : Genetics Population[SDE.ES]Environmental Sciences/Environmental and Society[SDV.GEN.GA]Life Sciences [q-bio]/Genetics/Animal geneticsGenetics PopulationEvolutionary biologyMutationbiology.proteinMESH: Microsatellite RepeatsMESH : AnimalsMESH : Sparrows[SDE.BE]Environmental Sciences/Biodiversity and EcologyMESH : Alleles[ SDE.ES ] Environmental Sciences/Environmental and SocietyMicrosatellite Repeats
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Evolutionary conservation advice for despotic populations: habitat heterogeneity favours conflict and reduces productivity in Seychelles magpie robins

2010

Individual preferences for good habitat are often thought to have a beneficial stabilizing effect for populations. However, if individuals preferentially compete for better-quality territories, these may become hotspots of conflict. We show that, in an endangered species, this process decreases the productivity of favoured territories to the extent that differences in productivity between territories disappear. Unlike predictions from current demographic theory on site-dependent population regulation (ideal despotic distribution), we show that population productivity is reduced if resources are distributed unevenly in space. Competition for high-quality habitat can thus have detrimental con…

0106 biological sciencesMaleConservation of Natural Resourcesmedia_common.quotation_subjectPopulationEndangered speciesBiologySeychelles010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyCompetition (biology)AnimalsPasseriformeseducationProductivityResearch ArticlesEcosystemGeneral Environmental Sciencemedia_commoneducation.field_of_studyIdeal free distributionGeneral Immunology and MicrobiologyBehavior AnimalEcology010604 marine biology & hydrobiologyReproductionHabitat conservationGeneral Medicine15. Life on landBiological EvolutionSpatial heterogeneitySocial DominanceBiological dispersalFemaleGeneral Agricultural and Biological SciencesTerritoriality
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Negative frequency-dependent selection of sexually antagonistic alleles in Myodes glareolus.

2011

Sexually antagonistic genetic variation, where optimal values of traits are sex-dependent, is known to slow the loss of genetic variance associated with directional selection on fitness-related traits. However, sexual antagonism alone is not sufficient to maintain variation indefinitely. Selection of rare forms within the sexes can help to conserve genotypic diversity. We combined theoretical models and a field experiment with Myodes glareolus to show that negative frequency-dependent selection on male dominance maintains variation in sexually antagonistic alleles. In our experiment, high-dominance male bank voles were found to have low-fecundity sisters, and vice versa. These results show …

0106 biological sciencesMaleLitter SizeFrequency-dependent selectionZoologyBiologySocial Environment010603 evolutionary biology01 natural sciencesLife history theory03 medical and health sciencesSexual Behavior AnimalGenetic variationAnimalsGenetic variabilityAlleleSelection GeneticAllelesEcosystem030304 developmental biology0303 health sciencesSex CharacteristicsMultidisciplinaryNatural selectionModels GeneticDirectional selectionArvicolinaeGenetic VariationFertilitySocial DominanceEvolutionary ecologyFemaleGenetic FitnessScience (New York, N.Y.)
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Egalitarian mixed-species bird groups enhance winter survival of subordinate group members but only in high-quality forests

2020

AbstractOnly dominant individuals have unrestricted access to contested resources in group-living animals. In birds, subordinates with restricted access to resources may respond to intragroup contests by acquiring extra body reserves to avoid periods of food shortage. In turn, higher body mass reduces agility and increases predation and mortality risk to subordinates. Birds often live in hierarchically organized mixed-species groups, in which heterospecific individuals are considered to substitute for conspecifics as protection against predators at a significantly reduced competition cost. Crested tits (Lophophanes cristatus) and willow tits (Poecile montanus) form mixed-species groups duri…

0106 biological sciencesMaleWillowBehavioural ecologyZoologylcsh:Medicine010603 evolutionary biology01 natural sciencesArticlePredationSongbirdsWillow titmedicineDominance (ecology)Animalslcsh:ScienceForaging sites ; mixed-species groups ; social complexity ; predation riskSocial evolutionMultidisciplinarybiologyAggressionlcsh:RInterspecific competitionbiology.organism_classificationAdaptation Physiological010601 ecologyDominance hierarchySocial DominancePoecilelcsh:QFemaleSeasonsmedicine.symptom
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Dust and grit matter: abrasives of different size lead to opposing dental microwear textures in experimentally fed sheep (Ovis aries)

2020

ABSTRACT External abrasives ingested along with the herbivore diet are considered main contributors to dental wear, though how the different sizes and concentrations of these abrasives influence wear remains unclear. Dental microwear texture analysis (DMTA) is an established method for dietary reconstruction which describes a tooth9s surface topography on a micrometre scale. The method has yielded conflicting results as to the effect of external abrasives. In the present study, a feeding experiment was performed on sheep (Ovis aries) fed seven diets of different abrasiveness. Our aim was to discern the individual effects of size (4, 50 and 130 µm) and concentration (0%, 4% and 8% of dry mat…

0106 biological sciencesMolar010506 paleontology10253 Department of Small Animals1109 Insect SciencePhysiologyEvolutionRuminantDental WearAquatic Science010603 evolutionary biology01 natural sciencesTexture (geology)MicrotextureAnimal scienceBehavior and Systematics1312 Molecular BiologyAnimalsGritOvisMolecular BiologySheep DomesticEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesFeeding experimentbiology630 Agriculture1104 Aquatic ScienceEcologyChemistryAbrasiveTooth wearDust1314 Physiologybiology.organism_classificationAbrasivesAnimal FeedDiet1105 Ecology Evolution Behavior and SystematicsTooth wearInsect Science570 Life sciences; biologyParticulate MatterAnimal Science and Zoology1103 Animal Science and Zoology
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Collisional mechanism of ligand release by Bombyx mori JHBP, a member of the TULIP / Takeout family of lipid transporters.

2020

International audience; Juvenile hormones (JHs) regulate important processes in insects, such as postembryonic development and reproduction. In the hemolymph of Lepidoptera, these lipophilic sesquiterpenic hormones are transported from their site of synthesis to target tissues by high affinity carriers, the juvenile hormone binding proteins (JHBPs). Lepidopteran JHBPs belong to a recently uncovered, yet very ancient family of proteins sharing a common lipid fold (TULIP domain) and involved in shuttling various lipid ligands. One important, but poorly understood aspect of JHs action, is the mechanism of hormone transfer to or through the plasma membranes of target cells. Since many membrane-…

0106 biological sciencesPhospholipidMothsLigands01 natural sciencesBiochemistryManduca sexta03 medical and health scienceschemistry.chemical_compoundProtein structureBombyx moriAnimalsMolecular Biology030304 developmental biology0303 health sciencesJHBPbiologyLigandTakeout-like proteinsfungiBombyx moriJuvenile HormoneIsothermal titration calorimetryBiological Transportbiology.organism_classificationBombyxLipid MetabolismTULIP domain010602 entomologyMembraneBiochemistrychemistryManduca sextaInsect ScienceJuvenile hormone[SDE]Environmental SciencesInsect ProteinsCarrier Proteins
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Antagonistic effects of a Mhc class I allele on malaria-infected house sparrows.

2008

8 pages; International audience; Genes of the Major Histocompatibility Complex (Mhc) play a fundamental role during the immune response because MHC molecules expressed on cell surface allow the recognition and presentation of antigenic peptides to T-lymphocytes. Although Mhc alleles have been found to correlate with pathogen resistance in several host-parasite systems, several studies have also reported associations between Mhc alleles and an accrued infection risk or an accelerated disease progression. The existence of these susceptibility alleles is puzzling, as the cost generated by the infection should rapidly eliminate them from the population. Here, we show that susceptibility alleles…

0106 biological sciencesPlasmodiumMESH : Molecular Sequence DataMESH : DNAGenes MHC Class IMESH: Amino Acid Sequenceco-evolutionMESH: Base SequenceMESH : Microsatellite Repeats01 natural sciencessusceptibilityMESH: SparrowsPleiotropy[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisMESH: AnimalsMESH : Malaria AvianGenetics0303 health scienceseducation.field_of_studybiologyMESH : Amino Acid Sequence[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]MESH: DNAMESH: Genetic Predisposition to DiseaseMESH: Genes MHC Class I3. Good healthMESH: Malaria Avian[ SDV.BID.EVO ] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]MESH: Haemosporidaavian malariaSparrows[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyMalaria AvianMolecular Sequence DataPopulationMESH: Genetics PopulationMajor histocompatibility complex010603 evolutionary biologyMESH : Genes MHC Class Iresistance03 medical and health sciencesImmune systemAvian malariaMHC class ImedicinePasser domesticusAnimalsGenetic Predisposition to Disease[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyAmino Acid SequenceAlleleeducationAllelesEcology Evolution Behavior and Systematics030304 developmental biologyparasite competitionMESH: Molecular Sequence DataBase Sequencehouse sparrowMESH: PlasmodiumMESH: Alleles[ SDV.GEN.GA ] Life Sciences [q-bio]/Genetics/Animal geneticsDNAHaemosporidamedicine.diseaseMESH : Genetics PopulationHistocompatibility[SDV.GEN.GA]Life Sciences [q-bio]/Genetics/Animal geneticsGenetics PopulationMESH : PlasmodiumImmunologybiology.proteinMESH : Base SequenceMESH : Genetic Predisposition to DiseaseAntagonistic pleiotropyMESH : SparrowsMESH : AnimalsMESH : HaemosporidaMESH: Microsatellite RepeatsMESH : AllelesMicrosatellite Repeats[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Plasmodium relictum infection and MHC diversity in the house sparrow (Passer domesticus).

2010

Antagonistic coevolution between hosts and parasites has been proposed as a mechanism maintaining genetic diversity in both host and parasite populations. In particular, the high level of genetic diversity usually observed at the major histocompatibility complex (MHC) is generally thought to be maintained by parasite-driven selection. Among the possible ways through which parasites can maintain MHC diversity, diversifying selection has received relatively less attention. This hypothesis is based on the idea that parasites exert spatially variable selection pressures because of heterogeneity in parasite genetic structure, abundance or virulence. Variable selection pressures should select for…

0106 biological sciencesPlasmodium[ SDV.IMM.IA ] Life Sciences [q-bio]/Immunology/Adaptive immunology01 natural sciencessusceptibilityMajor Histocompatibility Complex[ SDE ] Environmental SciencesGene Frequency[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisResearch ArticlesGeneral Environmental ScienceGenetics0303 health sciencesbiologyPlasmodium relictumGeneral Medicine3. Good health[SDV.IMM.IA]Life Sciences [q-bio]/Immunology/Adaptive immunologyGenetic structure[SDE]Environmental Sciencesavian malariaGeneral Agricultural and Biological SciencesSparrowsMalaria AvianAntagonistic CoevolutionMajor histocompatibility complex010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular Biologyresistance03 medical and health sciencesAvian malariamedicinePasser domesticusAnimalsSelection GeneticAllelesSelection (genetic algorithm)030304 developmental biologyLocal adaptationGenetic diversity[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyGeneral Immunology and Microbiologydiversifying selectionbiology.organism_classificationmedicine.diseaseImmunity InnatePlasmodium relictumbiology.protein[SDE.BE]Environmental Sciences/Biodiversity and Ecology[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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The gypsy database (GyDB) of mobile genetic elements: release 2.0

2011

This article introduces the second release of the Gypsy Database of Mobile Genetic Elements (GyDB 2.0): a research project devoted to the evolutionary dynamics of viruses and transposable elements based on their phylogenetic classification (per lineage and protein domain). The Gypsy Database (GyDB) is a long-term project that is continuously progressing, and that owing to the high molecular diversity of mobile elements requires to be completed in several stages. GyDB 2.0 has been powered with a wiki to allow other researchers participate in the project. The current database stage and scope are long terminal repeats (LTR) retroelements and relatives. GyDB 2.0 is an update based on the analys…

0106 biological sciencesProtein domainretroelementsLineage (evolution)[SDV]Life Sciences [q-bio]Retroviridae ProteinsCaulimoviridaeEukaryote evolutioncomputer.software_genrephylogeny01 natural sciencesDatabases GeneticRefSeqPhylogenyPriority journalbase de données0303 health sciencesRetrovirusPhylogenetic treeDatabaseSequence analysisdatabases geneticArticlesClassificationChemistryGenetic lineRetroelementsGenetic databaseComputer programBiologyArticleMobile genetic element03 medical and health sciencesLong terminal repeatWeb pagephylogénieVirus proteinGeneticsLife Science[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyAccess to informationTransposon030304 developmental biologyretroelements;phylogeny;software;terminal repeat sequences;databases geneticHidden Markov modelCauliflower mosaic virusCaulimovirussoftwareRetroposonTerminal Repeat SequencesDNA structureInterspersed Repetitive Sequencesterminal repeat sequencesNonhumanRetroviridaeData analysis softwareGenetic variabilityMobile genetic elementscomputerLENGUAJES Y SISTEMAS INFORMATICOSSoftware010606 plant biology & botanyPhylogenetic nomenclaturePhylogenetic tree
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An isoleucine-leucine substitution in chloroplastic acetyl-CoA carboxylase from green foxtail (Setaria viridis L. Beauv.) is responsible for resistan…

2002

The cDNAs encoding chloroplastic acetyl-CoA carboxylase (ACCase, EC 6.4.1.2) from three lines of Setaria viridis (L. Beauv.) resistant or sensitive to sethoxydim, and from one sethoxydim-sensitive line of Setaria italica (L. Beauv.) were cloned and sequenced. Sequence comparison revealed that a single isoleucine-leucine substitution discriminated ACCases from sensitive and resistant lines. Using near-isogenic lines of S. italica derived from interspecific hybridisation, we demonstrated that the transfer of the S. viridis mutant ACCase allele into a sethoxydim-sensitive S. italica line conferred resistance to this herbicide. We confirmed this result using allele-specific polymerase chain rea…

0106 biological sciencesSetariaChloroplastsMutantMolecular Sequence DataDrug ResistancePlant ScienceMolecular cloningPoaceae01 natural sciences[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants geneticsLeucine[SDV.GEN.GPL] Life Sciences [q-bio]/Genetics/Plants geneticsGeneticsPoint MutationAmino Acid SequenceIsoleucineComputingMilieux_MISCELLANEOUSAllelesPhylogenyGenes DominantbiologySequence Homology Amino AcidSetaria viridisCyclohexanonesHerbicidesAcetyl-CoA carboxylase04 agricultural and veterinary sciencesbiology.organism_classification3. Good healthPyruvate carboxylaseBiochemistryAmino Acid Substitution040103 agronomy & agriculture0401 agriculture forestry and fisheriesLeucineIsoleucineSequence Alignment010606 plant biology & botanyAcetyl-CoA CarboxylasePlanta
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