Search results for " EXPRESSION"

showing 10 items of 4731 documents

Tryptophan promotes morphological and physiological differentiation in Streptomyces coelicolor.

2015

The molecular mechanisms regulating tryptophan biosynthesis in actinomycetes are poorly understood; similarly, the possible roles of tryptophan in the differentiation program of microorganism life-cycle are still underexplored. To unveil the possible regulatory effect of this amino acid on gene expression, an integrated study based on quantitative teverse transcription-PCR (qRT-PCR) and proteomic approaches was performed on the actinomycete model Streptomyces coelicolor. Comparative analyses on the microorganism growth in a minimal medium with or without tryptophan supplementation showed that biosynthetic trp gene expression in S. coelicolor is not subjected to a negative regulation by the …

Spectrometry Mass Electrospray IonizationProteomeNitrogenStreptomyces coelicolorBiologySettore BIO/19 - Microbiologia GeneraleApplied Microbiology and BiotechnologyActinorhodinchemistry.chemical_compoundS. coelicolorGene clusterGene expressionElectrophoresis Gel Two-DimensionalGenechemistry.chemical_classificationSpores Bacterial2D-DIGE; Actinorhodin; CDA; Differentiation; S. coelicolor; TryptophanGene Expression ProfilingStreptomyces coelicolorTryptophanTryptophanGeneral MedicineGene Expression Regulation Bacterialbiology.organism_classificationCarbonAmino acidCulture MediaActinorhodinCDAchemistryBiochemistryDifferentiationProteomeMicroscopy Electron Scanning2D-DIGEEnergy MetabolismBiotechnologyChromatography LiquidApplied microbiology and biotechnology
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Hardening of bio-silica in sponge spicules involves an aging process after its enzymatic polycondensation: evidence for an aquaporin-mediated water a…

2011

Abstract Background Spicules, the siliceous skeletal elements of the siliceous sponges, are synthesized enzymatically via silicatein. The product formed, bio-silica, constitutes their inorganic matrix. It remained unexplored which reactions are involved in molding of the amorphous bio-silica and formation of a solid and rigid biomaterial. Methods Cell and molecular biological techniques have been applied to analyze processes resulting in the hardening of the enzymatically synthesized bio-silica. The demosponge Suberites domuncula has been used for the studies. Results Cell aggregates (primmorphs) from the sponge S . domuncula , grown in the presence of Mn-sulfate, form spicules that compris…

SpiculeAbsorption of waterTime FactorsMolecular Sequence DataBiophysicsMineralogyFluorescent Antibody TechniqueGene Expression02 engineering and technologyAquaporinsBiochemistryPhase TransitionAbsorption03 medical and health sciencesMagnesium SulfateSponge spiculeDemospongeAnimalsAmino Acid SequenceMolecular BiologyPhylogeny030304 developmental biology0303 health sciencesSyneresisbiologySequence Homology Amino AcidChemistryReverse Transcriptase Polymerase Chain ReactionBiomaterialSpectrometry X-Ray EmissionWater021001 nanoscience & nanotechnologybiology.organism_classificationSilicon DioxideCathepsinsSuberites domunculaSpongeChemical engineeringMicroscopy Electron Scanning0210 nano-technologySuberitesBiochimica et biophysica acta
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Sponge biosilica formation involves syneresis following polycondensation in vivo.

2011

Syneresis is a process observed during the maturation/aging of silica gels obtained by sol-gel synthesis that results in shrinkage and expulsion of water due to a rearrangement and increase in the number of bridging siloxane bonds. Here we describe how the process of biosilica deposition during spicule ("biosilica" skeleton of the siliceous sponges) formation involves a phase of syneresis that occurs after the enzyme-mediated polycondensation reaction. Primmorphs from the demosponge Suberites domuncula were used to study syneresis and the inhibition of this mechanism. We showed by scanning electron microscopy that spicules added to primmorphs that have been incubated with manganese sulfate …

SpiculeAquaporin02 engineering and technologyAquaporinsBiochemistry03 medical and health scienceschemistry.chemical_compoundDemospongeSponge spiculeSpectroscopy Fourier Transform InfraredAnimalsMolecular Biology030304 developmental biology0303 health sciencesbiologySyneresisSulfatesOrganic ChemistryWater021001 nanoscience & nanotechnologybiology.organism_classificationSilicon DioxideCathepsinsSilicateSuberites domunculaSpongeBiochemistrychemistryGene Expression RegulationManganese CompoundsThermogravimetryBiophysicsMolecular Medicine0210 nano-technologySuberitesChembiochem : a European journal of chemical biology
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Selenium affects biosilica formation in the demosponge Suberites domuncula

2005

Selenium is a trace element found in freshwater and the marine environment. We show that it plays a major role in spicule formation in the demosponge Suberites domuncula. If added to primmorphs, an in vitro sponge cell culture system, it stimulates the formation of siliceous spicules. Using differential display of transcripts, we demonstrate that, after a 72-h exposure of primmorphs to selenium, two genes are up-regulated; one codes for selenoprotein M and the other for a novel spicule-associated protein. The deduced protein sequence of selenoprotein M (14 kDa) shows characteristic features of metazoan selenoproteins. The spicule-associated protein (26 kDa) comprises six characteristic repe…

SpiculeBlotting WesternMolecular Sequence DataFluorescent Antibody Techniquechemistry.chemical_elementselenium; silica; silicatein; spicules; spongesBiochemistryAntibodiesSeleniumSponge spiculeDemospongeAnimalsAmino Acid SequenceSelenoproteinsMolecular Biologychemistry.chemical_classificationGlutathione PeroxidaseBase SequencebiologyGene Expression ProfilingProteinsCell BiologyAnatomySilicon Dioxidebiology.organism_classificationCathepsinsUp-RegulationAmino acidSuberites domunculaSpongeBiochemistrychemistrySelenoproteinSuberitesSeleniumFEBS Journal
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Biosilica formation in spicules of the sponge Suberites domuncula: synchronous expression of a gene cluster.

2005

The formation of spicules is a complicated morphogenetic process in sponges (phylum Porifera). The primmorph system was used to demonstrate that in the demosponge Suberites domuncula the synthesis of the siliceous spicules starts intracellularly and is dependent on the concentration of silicic acid. To understand spicule formation, a cluster of genes was isolated. In the center of this cluster is the silicatein gene, which codes for the enzyme that synthesizes spicules. This gene is flanked by an ankyrin repeat gene at one side and by a tumor necrosis factor receptor-associated factor and a protein kinase gene at the other side. All genes are strongly expressed in primmorphs and intact anim…

SpiculebiologyBase SequenceMolecular Sequence DataSilicic Acidbiology.organism_classificationCathepsinsCell biologyMicrobiologyEnzymesSuberites domunculaSpongeDemospongeSponge spiculeGene Expression RegulationGene expressionGene clusterGeneticsAnimalsSuberitesGeneGenomics
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NineTeen Complex-subunit Salsa is required for efficient splicing of a subset of introns and dorsal-ventral patterning

2020

© 2020 Rathore et al. This article is distributed exclusively by the RNASociety for the first 12 months after the full-issue publication date (see http://rnajournal.cshlp.org/site/misc/terms.xhtml). After 12 months, it is available under a Creative Commons License (Attribution-NonCommercial 4.0 International), as described at http://creativecommons.org/licenses/by-nc/4.0/.

SpliceosomeBiochemistry & Molecular BiologyRNA SplicingBiologySplicingGermlineArticleMidblastulaDorsal-ventral patterning03 medical and health sciencesAnimalsDrosophila ProteinsFemale fertilityGurkenMolecular BiologyGene030304 developmental biologyBody Patterning0303 health sciencesMessenger RNA030302 biochemistry & molecular biologyfungiIntronGene Expression Regulation DevelopmentalTransforming Growth Factor alphaRNA Helicase AIntronsCell biologyDorsal-ventral patterning; Drosophila; Female fertility; Gurken; Splicing; dorsal–ventral patterning; female fertility; splicingDNA-Binding ProteinsDrosophila melanogasterRNA splicingSpliceosomesFemaleDrosophilaInfertility Female
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Stable expression in HEK-293 cells of the rat alpha3/beta4 subtype of neuronal nicotinic acetylcholine receptor.

1996

The alpha3/beta4 subtype of neuronal nicotinic acetylcholine receptor (nAChR) was stably expressed in human embryonic kidney (HEK) 293 cells that co-expressed a voltage-gated Ca2+ channel. alpha3/beta4-nAChR-expressing clones were identified using the fura-2 Ca2+ imaging technique, and were further characterised by single-cell and whole-cell patch-clamp studies. Acetylcholine (ACh) induced fast activating currents which showed desensitisation and inward rectification. The conductance of the ACh-activated channel was 29 pS. The order of potency of the nicotinic agonists tested was cytisine approximately = nicotine > acetylcholine. The EC50 value for ACh was 145 microM; the Hill coefficient w…

Stable expressionPatch-Clamp Techniquesα3/β4 nAChRBiophysicsNicotinic AntagonistsPharmacologyReceptors NicotinicTransfectionBiochemistryCell LineGanglionic nAChRCa2+ imagingGanglion type nicotinic receptorStructural BiologyMuscarinic acetylcholine receptorGeneticsmedicineAnimalsHumansNicotinic AgonistsNicotinic AntagonistHEK cellMolecular BiologyNeuronsurogenital systemChemistryMuscarinic acetylcholine receptor M3Cell BiologyAcetylcholineRecombinant ProteinsRatsNicotinic acetylcholine receptorNicotinic agonistCalciumCalcium ChannelsAlpha-4 beta-2 nicotinic receptorAcetylcholinemedicine.drugFEBS letters
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Tribolium castaneum immune defense genes are differentially expressed in response to Bacillus thuringiensis toxins sharing common receptor molecules …

2015

In Tribolium castaneum larvae we have demonstrated by RNA interference knockdown that the Bacillus thuringiensis Cry3Ba toxin receptors Cadherin-like and Sodium solute symporter proteins are also functional receptors of the less active Cry3Aa toxin. Differences in susceptibility to B. thuringiensis infection might not only rely on toxin-receptor interaction but also on host defense mechanisms. We compared the expression of the immune related genes encoding Apolipophorin-III and two antimicrobial peptides, Defensin3 and Defensin2 after B. thuringiensis challenge. All three genes were up-regulated following Cry3Ba spore-crystal intoxication whereas only Defensins gene expression was induced u…

Staphylococcus aureusImmunologyAntimicrobial peptidesBacterial ToxinsMolecular Sequence DataBacillus thuringiensisBiologymedicine.disease_causeMicrobiologyDefensinsHemolysin ProteinsImmune systemBacterial ProteinsRNA interferenceBacillus thuringiensisGene expressionCandida albicansmedicineEscherichia coliAnimalsAmino Acid SequenceRNA Small InterferingDefensinTriboliumInnate immune systemBacillus thuringiensis ToxinsSymportersToxinfungibiology.organism_classificationAnti-Bacterial AgentsEndotoxinsApolipoproteinsLarvaInsect ProteinsRNA InterferenceDevelopmental BiologyDevelopmental and comparative immunology
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Subcytocidal attack by staphylococcal alpha-toxin activates NF-kappaB and induces interleukin-8 production.

2001

ABSTRACTFormation of transmembrane pores by staphylococcal alpha-toxin can provoke a spectrum of events depending on target cell species and toxin dose, and in certain cases, repair of the lesions has been observed. Here, we report that transcriptional processes are activated as a response of cells to low toxin doses. Exposure of monocytic (THP-1) or epithelial (ECV304) cells to 40 to 160 ng/ml alpha-toxin provoked a drop in cellular ATP level that was followed by secretion of substantial amounts of interleukin-8 (IL-8). Cells transfected with constructs comprising the proximal IL-8 promoter fused to luciferase or to green fluorescent protein cDNA exhibited enhanced reporter gene expression…

StaphylococcusImmunologyBacterial ToxinsBiologymedicine.disease_causeMicrobiologyCell LineHemolysin ProteinsAdenosine TriphosphatemedicineHumansSecretionLuciferaseInterleukin 8Promoter Regions GeneticRegulation of gene expressionReporter geneCellular Microbiology: Pathogen-Host Cell Molecular InteractionsToxinInterleukin-8NF-kappa BTransfectionMolecular biologyInfectious DiseasesCell cultureParasitologyCaltech Library ServicesInfection and immunity
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Cellular, physiological, and molecular adaptive responses of Erwinia amylovora to starvation.

2013

Erwinia amylovora causes fire blight, a destructive disease of rosaceous plants distributed worldwide. This bacterium is a nonobligate pathogen able to survive outside the host under starvation conditions, allowing its spread by various means such as rainwater. We studied E. amylovora responses to starvation using water microcosms to mimic natural oligotrophy. Initially, survivability under optimal (28 °C) and suboptimal (20 °C) growth temperatures was compared. Starvation induced a loss of culturability much more pronounced at 28 °C than at 20 °C. Natural water microcosms at 20 °C were then used to characterize cellular, physiological, and molecular starvation responses of E. amylovora. Ch…

StarvationMicrobial ViabilityEcologybiologyVirulenceMotilityVirulenceGene ExpressionErwiniabiology.organism_classificationApplied Microbiology and BiotechnologyMicrobiologyAdaptation PhysiologicalViable but nonculturableMicrobiologyFire blightmedicineErwinia amylovoramedicine.symptomWater MicrobiologyPathogenBacteriaFEMS microbiology ecology
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