Search results for " Error."
showing 10 items of 1034 documents
PACo: a novel procrustes application to cophylogenetic analysis.
2013
We present Procrustean Approach to Cophylogeny (PACo), a novel statistical tool to test for congruence between phylogenetic trees, or between phylogenetic distance matrices of associated taxa. Unlike previous tests, PACo evaluates the dependence of one phylogeny upon the other. This makes it especially appropriate to test the classical coevolutionary model that assumes that parasites that spend part of their life in or on their hosts track the phylogeny of their hosts. The new method does not require fully resolved phylogenies and allows for multiple host-parasite associations. PACo produces a Procrustes superimposition plot enabling a graphical assessment of the fit of the parasite phyloge…
Accuracy assessment of fraction of vegetation cover and leaf area index estimates from pragmatic methods in a cropland area
2009
The fraction of vegetation cover (FVC) and the leaf area index (LAI) are important parameters for many agronomic, ecological and meteorological applications. Several in-situ and remote sensing techniques for estimating FVC and LAI have been developed in recent years. In this paper, the uncertainty of in-situ FVC and LAI measurements was evaluated by comparing estimates from LAI-2000 and digital hemispherical photography (DHP). The accuracy achieved with a spectral mixture analysis algorithm and two vegetation indices-based methods was assessed using atmospherically corrected Landsat Thematic Mapper (TM) data over the Barrax cropland area where the European Space Agency (ESA) SENtinel-2 and …
Compensation of compliance errors in parallel manipulators composed of non-perfect kinematic chains
2012
The paper is devoted to the compliance errors compensation for parallel manipulators under external loading. Proposed approach is based on the non-linear stiffness modeling and reduces to a proper adjusting of a target trajectory. In contrast to previous works, in addition to compliance errors caused by machining forces, the problem of assembling errors caused by inaccuracy in the kinematic chains is considered. The advantages and practical significance of the proposed approach are illustrated by examples that deal with groove milling with Orthoglide manipulator.
Compliance error compensation technique for parallel robots composed of non-perfect serial chains
2012
The paper presents the compliance errors compensation technique for over-constrained parallel manipulators under external and internal loadings. This technique is based on the non-linear stiffness modeling which is able to take into account the influence of non-perfect geometry of serial chains caused by manufacturing errors. Within the developed technique, the deviation compensation reduces to an adjustment of a target trajectory that is modified in the off-line mode. The advantages and practical significance of the proposed technique are illustrated by an example that deals with groove milling by the Orthoglide manipulator that considers different locations of the workpiece. It is also de…
Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases
2019
AbstractThe widespread occurrence of repetitive stretches of DNA in genomes of organisms across the tree of life imposes fundamental challenges for sequencing, genome assembly, and automated annotation of genes and proteins. This multi-level problem can lead to errors in genome and protein databases that are often not recognized or acknowledged. As a consequence, end users working with sequences with repetitive regions are faced with ‘ready-to-use’ deposited data whose trustworthiness is difficult to determine, let alone to quantify. Here, we provide a review of the problems associated with tandem repeat sequences that originate from different stages during the sequencing-assembly-annotatio…
Analyzing Learned Representations of a Deep ASR Performance Prediction Model
2018
This paper addresses a relatively new task: prediction of ASR performance on unseen broadcast programs. In a previous paper, we presented an ASR performance prediction system using CNNs that encode both text (ASR transcript) and speech, in order to predict word error rate. This work is dedicated to the analysis of speech signal embeddings and text embeddings learnt by the CNN while training our prediction model. We try to better understand which information is captured by the deep model and its relation with different conditioning factors. It is shown that hidden layers convey a clear signal about speech style, accent and broadcast type. We then try to leverage these 3 types of information …
Retrieval of aboveground crop nitrogen content with a hybrid machine learning method
2020
Abstract Hyperspectral acquisitions have proven to be the most informative Earth observation data source for the estimation of nitrogen (N) content, which is the main limiting nutrient for plant growth and thus agricultural production. In the past, empirical algorithms have been widely employed to retrieve information on this biochemical plant component from canopy reflectance. However, these approaches do not seek for a cause-effect relationship based on physical laws. Moreover, most studies solely relied on the correlation of chlorophyll content with nitrogen, and thus neglected the fact that most N is bound in proteins. Our study presents a hybrid retrieval method using a physically-base…
Human experts vs. machines in taxa recognition
2020
The step of expert taxa recognition currently slows down the response time of many bioassessments. Shifting to quicker and cheaper state-of-the-art machine learning approaches is still met with expert scepticism towards the ability and logic of machines. In our study, we investigate both the differences in accuracy and in the identification logic of taxonomic experts and machines. We propose a systematic approach utilizing deep Convolutional Neural Nets with the transfer learning paradigm and extensively evaluate it over a multi-pose taxonomic dataset with hierarchical labels specifically created for this comparison. We also study the prediction accuracy on different ranks of taxonomic hier…
Optimal one-shot quantum algorithm for EQUALITY and AND
2017
We study the computation complexity of Boolean functions in the quantum black box model. In this model our task is to compute a function $f:\{0,1\}\to\{0,1\}$ on an input $x\in\{0,1\}^n$ that can be accessed by querying the black box. Quantum algorithms are inherently probabilistic; we are interested in the lowest possible probability that the algorithm outputs incorrect answer (the error probability) for a fixed number of queries. We show that the lowest possible error probability for $AND_n$ and $EQUALITY_{n+1}$ is $1/2-n/(n^2+1)$.
Isometric Words Based on Swap and Mismatch Distance
2023
An edit distance is a metric between words that quantifies how two words differ by counting the number of edit operations needed to transform one word into the other one. A word f is said isometric with respect to an edit distance if, for any pair of f-free words u and v, there exists a transformation of minimal length from u to v via the related edit operations such that all the intermediate words are also f-free. The adjective 'isometric' comes from the fact that, if the Hamming distance is considered (i.e., only mismatches), then isometric words are connected with definitions of isometric subgraphs of hypercubes. We consider the case of edit distance with swap and mismatch. We compare it…