Search results for " IS"

showing 10 items of 5661 documents

Heterogeneous Interactions between Gas-Phase Pyruvic Acid and Hydroxylated Silica Surfaces: A Combined Experimental and Theoretical Study

2019

The adsorption of gas-phase pyruvic acid (CH3COCOOH) on hydroxylated silica particles has been investigated at 296 K using transmission Fourier transform infrared (FTIR) spectroscopy and theoretical simulations. Under dry conditions (<1% relative humidity, RH), both the trans-cis (Tc) and trans-trans (Tt) pyruvic acid conformers are observed on the surface as well as the (hydrogen bonded) pyruvic acid dimer. The detailed surface interactions were further understood through ab initio molecular dynamics simulations. Under higher relative humidity conditions (above 10% RH), adsorbed water competes for surface adsorption sites. Adsorbed water is also observed to change the relative populations …

010304 chemical physicsHydrogenChemistryDimerInorganic chemistrychemistry.chemical_element010402 general chemistry01 natural sciences0104 chemical scienceschemistry.chemical_compoundAdsorption13. Climate action0103 physical sciencesRelative humidityPyruvic acid[PHYS.PHYS.PHYS-CHEM-PH]Physics [physics]/Physics [physics]/Chemical Physics [physics.chem-ph]Physical and Theoretical ChemistryFourier transform infrared spectroscopySpectroscopyConformational isomerismComputingMilieux_MISCELLANEOUS
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Matrix isolation and quantum chemical studies on the H2O2–SO2complex

2004

Complexation and photochemical reactions of hydrogen peroxide and sulfur dioxide have been studied in solid Ar, Kr and Xe. Complexes between H2O2 and SO2 are characterized using Fourier transform infrared spectroscopy and ab initio calculations. In solid Ar, the H2O2–SO2 complex absorptions are found at wavenumbers of 3572.8, 3518.7, 3511.2, 3504.3, 1340.3, 1280.2 and 1149.9 cm−1. In Kr and Xe matrices, the bonded OH stretching frequencies deviate from the values in Ar, and we propose that the matrix surrounding influences the structure of the H2O2–SO2 complex. UV photolysis of the H2O2–SO2 was also studied in solid Ar, Kr and Xe. This photolysis produces mainly a complex between sulfur tri…

010304 chemical physicsPhotodissociationMatrix isolationGeneral Physics and Astronomy010402 general chemistry7. Clean energy01 natural sciences0104 chemical scienceschemistry.chemical_compoundMatrix (mathematics)chemistryComputational chemistryAb initio quantum chemistry methods0103 physical sciencesSulfur trioxidePhysical chemistryPhysical and Theoretical ChemistryFourier transform infrared spectroscopyHydrogen peroxideSulfur dioxidePhys. Chem. Chem. Phys.
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Exotic SiO(2)H(2) Isomers: Theory and Experiment Working in Harmony.

2016

Replacing carbon with silicon can result in dramatic and unanticipated changes in isomeric stability, as the well-studied CO2H2 and the essentially unknown SiO2H2 systems illustrate. Guided by coupled-cluster calculations, three SiO2H2 isomers have been detected and spectroscopically characterized in a molecular beam discharge source using rotational spectroscopy. The cis,trans conformer of dihydroxysilylene HOSiOH, the ground-state isomer, and the high-energy, metastable dioxasilirane c-H2SiO2 are abundantly produced in a dilute SiH4/O2 electrical discharge, enabling precise structural determinations of both by a combination of isotopic measurements and calculated vibrational corrections. …

010304 chemical physicsSiliconChemistrychemistry.chemical_element010402 general chemistry01 natural sciencesDissociation (chemistry)0104 chemical sciencesComputational chemistryMetastability0103 physical sciencesRotational spectrumPhysical chemistryGeneral Materials ScienceElectric dischargeRotational spectroscopyPhysical and Theoretical ChemistryMolecular beamConformational isomerismThe journal of physical chemistry letters
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Heavy enzymes and the rational redesign of protein catalysts

2019

Abstract An unsolved mystery in biology concerns the link between enzyme catalysis and protein motions. Comparison between isotopically labelled “heavy” dihydrofolate reductases and their natural‐abundance counterparts has suggested that the coupling of protein motions to the chemistry of the catalysed reaction is minimised in the case of hydride transfer. In alcohol dehydrogenases, unnatural, bulky substrates that induce additional electrostatic rearrangements of the active site enhance coupled motions. This finding could provide a new route to engineering enzymes with altered substrate specificity, because amino acid residues responsible for dynamic coupling with a given substrate present…

010402 general chemistryProtein Engineering01 natural sciencesBiochemistryCatalysisEnzyme catalysisisotope effectsCatalytic DomainDihydrofolate reductaseMolecular BiologyAlcohol dehydrogenasechemistry.chemical_classificationalcohol dehydrogenasesCarbon Isotopesdihydrofolate reductasesbiologyBacteriaNitrogen Isotopes010405 organic chemistryConceptOrganic ChemistryAlcohol DehydrogenaseActive siteSubstrate (chemistry)Protein engineeringDeuteriumCombinatorial chemistrymolecular dynamics0104 chemical sciencesKineticsTetrahydrofolate Dehydrogenaseenzyme engineeringEnzymechemistrybiology.proteinBiocatalysisMolecular MedicineConcepts
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The substituent effect of π-electron delocalization in N-methylamino-nitropyridine derivatives: crystal structure and DFT calculations

2020

AbstractThe crystal and molecular structures of 3-(N-methylamino)-2-nitropyridine, 5-(N-methylamino)-2-nitropyridine and 2-(N-methylamino)-5-nitropyridine have been characterized by X-ray diffraction. To perform conformational analysis, the geometries of the compounds as well as their conformers and rotamers were optimized at the B3LYP/6-311++G(3df,3pd) level. The resulting data were used to analyze the π-electron delocalization effect in relation to the methylamino group rotation in ortho-, meta- and para-substitution positions. Quantitative aromaticity indices were calculated based on which we estimated the electronic structures of the analyzed compounds. The substituent effect of the met…

010405 organic chemistryAromaticityCrystal structureSubstituentAromaticityCrystal structure010402 general chemistryCondensed Matter PhysicsRing (chemistry)DFT calculations01 natural sciences0104 chemical sciencesCrystallographychemistry.chemical_compoundDelocalized electronSubstituent effectchemistryCharge of the substituent active regionIntramolecular forcePyridineSubstituent effect stabilization energyPhysical and Theoretical ChemistryConformational isomerismStructural Chemistry
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Mechanism and cis/trans Selectivity of Vinylogous Nazarov-type [6π] Photocyclizations

2017

Vinylogous Nazarov-type cyclizations yield seven-membered rings from butadienyl vinyl ketones via a photochemical [6π] photocyclization followed by subsequent isomerization steps. The mechanism of this recently developed method was investigated using unrestricted DFT, SF-TDDFT, and CASSCF/NEVPT2 calculations, suggesting three different pathways that lead either to pure trans, pure cis, or mixed cis/trans configured products. Singlet biradicals or zwitterions occur as intermediates. The computational results are supported by deuterium-labeling experiments.

010405 organic chemistryChemistryStereochemistryYield (chemistry)Organic ChemistrySinglet state010402 general chemistrySelectivity01 natural sciencesIsomerizationCis–trans isomerism0104 chemical sciencesThe Journal of Organic Chemistry
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Cis- and trans molybdenum oxo complexes of a prochiral tetradentate aminophenolate ligand : Synthesis, characterization and oxotransfer activity

2020

Abstract Reaction of [MoO2Cl2(dmso)2] with the tetradentate O2N2 donor ligand papy [H2papy = N-(2-hydroxybenzyl)-N-(2-picolyl)glycine] leads to formation of the dioxomolybdenum(VI) complex [MoO2(papy)] (1) as a mixture of cis and trans isomers. Recrystallization from methanol furnishes solid cis-1, whereas the use of a dichloromethane-hexane mixture allows for the isolation of the trans-1 isomer. Both isomers have been structurally characterized by X-ray crystallography and the energy difference between the isomeric pair has been investigated by electronic structure calculations. Optimization of two configurational isomers in the gas phase predicts the trans isomer to lie 2.5 kcal/mol lower…

010405 organic chemistryChemistrycomputational modellingStereoisomerism010402 general chemistry01 natural sciencesMedicinal chemistry0104 chemical sciencesCatalysisInorganic ChemistrySolventvariable temperature NMRTripodal ligandepoxidationMaterials ChemistryTheoretical chemistryProton NMRtripodal ligandPhysical and Theoretical ChemistryIsomerizationOxo Atom TransferCis–trans isomerism
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Isolating reactive metal-based species in Metal-Organic Frameworks - viable strategies and opportunities.

2021

Structural insight into reactive species can be achieved via strategies such as matrix isolation in frozen glasses, whereby species are kinetically trapped, or by confinement within the cavities of host molecules. More recently, Metal–Organic Frameworks (MOFs) have been used as molecular scaffolds to isolate reactive metal-based species within their ordered pore networks. These studies have uncovered new reactivity, allowed observation of novel metal-based complexes and clusters, and elucidated the nature of metal-centred reactions responsible for catalysis. This perspective considers strategies by which metal species can be introduced into MOFs and highlights some of the advantages and lim…

010405 organic chemistryChemistryfungiMatrix isolationNanotechnologyGeneral Chemistry010402 general chemistry01 natural sciences0104 chemical sciencesMetalChemistryvisual_artvisual_art.visual_art_mediumMoleculeMetal-organic frameworkReactivity (chemistry)Chemical science
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The separation of cis- and trans-1,3-cyclohexanediol isomers by copper complexation. Crystal structures of cis-1,3-cyclohexanediol and copper(II) chl…

2002

Abstract A 1:1 complex between copper(II) chloride and cis-1,3-cyclohexanediol has been synthesized and its crystal structure determined. The structure is composed of two different dinuclear [CuCl2(c-13chd)]2 units in which the copper(II) ions are surrounded by the two oxygen atoms of the diol and the two halide ions in a distorted cis-square planar arrangement in both cases. A fifth coordination site is occupied by a halide ion in one dinuclear unit for both copper ions and an O atom belonging to the adjacent CuCl2(c-13chd) moiety in the other dinuclear unit for both copper ions, thus forming a distorted square pyramidal geometry for the metals in all cases. The ability of CuCl2 to prefere…

010405 organic chemistryInorganic chemistryHalidechemistry.chemical_elementCrystal structure010402 general chemistry01 natural sciencesChlorideCopperSquare pyramidal molecular geometry0104 chemical sciencesInorganic Chemistrychemistry.chemical_compoundCrystallographychemistryMaterials ChemistrymedicineCopper(II) chlorideMoietyPhysical and Theoretical ChemistryCis–trans isomerismmedicine.drugPolyhedron
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Highly Stable Neutral and Positively Charged Dicarbollide Sandwich Complexes

2005

Novel sandwich metallacarboranes commo-[3,3'-Ni(8-SMe2-1,2-C2B9H10)2] (1), commo-[3,3'-Co(8-SMe2-1,2-C2B9H10)2]+ (2+), commo-[3,3'-Ru(8-SMe2-1,2-C2B9H10)2] (4) and commo-[3,3'-Fe(8-SMe2-1,2-C2B9H10)2] (5) have been prepared by reaction of [10-SMe2-7,8-nido-C2B9H10]- with NiCl2 x 6 H2O, CoCl2, [RuCl2(dmso)4] and [FeCl2(dppe)], respectively. Reduction of 2+ with metallic Zn leads to the neutral and isolable complex commo-[3,3'-Co(8-SMe2-1,2-C2B9H10)2] (3). Theoretical calculations using the ZINDO/1 semiempirical method show three energy minima for complexes 1-3 and 5 that agree with the presence of three different rotamers in solution at low temperature, while four relative energy minima have…

010405 organic chemistryLigandOrganic ChemistryGeneral ChemistryCrystal structure010402 general chemistry01 natural sciencesCatalysis0104 chemical sciencesMetalNMR spectra databasechemistry.chemical_compoundCrystallographyFerrocenechemistryComputational chemistryvisual_artvisual_art.visual_art_mediumMoleculeZINDOConformational isomerismChemistry - A European Journal
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