Search results for " Images."
showing 10 items of 193 documents
Fuzzy Clustering of Histopathological Images Using Deep Learning Embeddings
2021
Metric learning is a machine learning approach that aims to learn a new distance metric by increas- ing (reducing) the similarity of examples belonging to the same (different) classes. The output of these approaches are embeddings, where the input data are mapped to improve a crisp or fuzzy classifica- tion process. The deep metric learning approaches regard metric learning, implemented by using deep neural networks. Such models have the advantage to discover very representative nonlinear embed- dings. In this work, we propose a triplet network deep metric learning approach, based on ResNet50, to find a representative embedding for the unsupervised fuzzy classification of benign and maligna…
Deep CNN for IIF Images Classification in Autoimmune Diagnostics
2019
The diagnosis and monitoring of autoimmune diseases are very important problem in medicine. The most used test for this purpose is the antinuclear antibody (ANA) test. An indirect immunofluorescence (IIF) test performed by Human Epithelial type 2 (HEp-2) cells as substrate antigen is the most common methods to determine ANA. In this paper we present an automatic HEp-2 specimen system based on a convolutional neural network method able to classify IIF images. The system consists of a module for features extraction based on a pre-trained AlexNet network and a classification phase for the cell-pattern association using six support vector machines and a k-nearest neighbors classifier. The class…
Multimodal Images Classification using Dense SURF, Spectral Information and Support Vector Machine
2019
International audience; The multimodal image classification is a challenging area of image processing which can be used to examine the wall painting in the cultural heritage domain. In such classification, a common space of representation is important. In this paper, we present a new method for multimodal representation learning, by using a pixel-wise feature descriptor named dense Speed Up Robust Features (SURF) combined with the spectral information carried by the pixel. For classification of extracted features we have used support vector machine (SVM). Our database was extracted from acquisition on cultural heritage wall paintings that contain four modalities UV, Visible, IRR and fluores…
Automatic skull stripping in MRI based on morphological filters and fuzzy c-means segmentation
2012
In this paper a new automatic skull stripping method for T1-weighted MR image of human brain is presented. Skull stripping is a process that allows to separate the brain from the rest of tissues. The proposed method is based on a 2D brain extraction making use of fuzzy c-means segmentation and morphological operators applied on transversal slices. The approach is extended to the 3D case, taking into account the result obtained from the preceding slice to solve the organ splitting problem. The proposed approach is compared with BET (Brain Extraction Tool) implemented in MRIcro software.
Bias artifact suppression on MR volumes.
2007
RF-Inhomogeneity correction is a relevant research topic in the field of Magnetic Resonance Imaging (MRI). A volume corrupted by this artifact exhibits nonuni- form illumination both inside a single slice and between adjacent ones. In this work a bias correction technique is presented, which suppresses this artifact on MR vol- umes scanned from different body parts without any a-priori hypothesis on the artifact model. Theoretical foundations of the method are reported together with experimental results and a comparison is presented with both the 2D version of the algorithm and other techniques that are widely used in MRI literature.
Robust Resolution-Enhanced Prostate Segmentation in Magnetic Resonance and Ultrasound Images through Convolutional Neural Networks
2021
[EN] Prostate segmentations are required for an ever-increasing number of medical applications, such as image-based lesion detection, fusion-guided biopsy and focal therapies. However, obtaining accurate segmentations is laborious, requires expertise and, even then, the inter-observer variability remains high. In this paper, a robust, accurate and generalizable model for Magnetic Resonance (MR) and three-dimensional (3D) Ultrasound (US) prostate image segmentation is proposed. It uses a densenet-resnet-based Convolutional Neural Network (CNN) combined with techniques such as deep supervision, checkpoint ensembling and Neural Resolution Enhancement. The MR prostate segmentation model was tra…
Deep Convolutional Neural Network for HEp-2 fluorescence intensity classification
2019
Indirect ImmunoFluorescence (IIF) assays are recommended as the gold standard method for detection of antinuclear antibodies (ANAs), which are of considerable importance in the diagnosis of autoimmune diseases. Fluorescence intensity analysis is very often complex, and depending on the capabilities of the operator, the association with incorrect classes is statistically easy. In this paper, we present a Convolutional Neural Network (CNN) system to classify positive/negative fluorescence intensity of HEp-2 IIF images, which is important for autoimmune diseases diagnosis. The method uses the best known pre-trained CNNs to extract features and a support vector machine (SVM) classifier for the …
An Automatic HEp-2 Specimen Analysis System Based on an Active Contours Model and an SVM Classification
2019
The antinuclear antibody (ANA) test is widely used for screening, diagnosing, and monitoring of autoimmune diseases. The most common methods to determine ANA are indirect immunofluorescence (IIF), performed by human epithelial type 2 (HEp-2) cells, as substrate antigen. The evaluation of ANA consist an analysis of fluorescence intensity and staining patterns. This paper presents a complete and fully automatic system able to characterize IIF images. The fluorescence intensity classification was obtained by performing an image preprocessing phase and implementing a Support Vector Machines (SVM) classifier. The cells identification problem has been addressed by developing a flexible segmentati…
Light-Tissue Interaction Model for the Analysis of Skin Ulcer Multi-spectral Images
2017
International audience; Skin ulcers (SU) are ones of the most frequent causes of consultation in primary health-care units (PHU) in tropical areas. However, the lack of specialized physicians in those areas, leads to improper diagnosis and management of the patients. There is then a need to develop tools that allow guiding the physicians toward a more accurate diagnosis. Multi-spectral imaging systems are a potential non-invasive tool that could be used in the analysis of skin ulcers. With these systems it is possible to acquire optical images at different wavelengths which can then be processed by means of mathematical models based on optimization approaches. The processing of those kind o…
Functional statistics based method for the evaluation of the registration of sequences of 3D perfusion MR images
2011
Accurate registration of medical images is a necessary task for several important diagnosis techniques. Nevertheless, it is a difficult challenge due to movement of the patient, deformations, noise in the signal, etc. Besides, evaluation of the quality of the performed registration is also troublesome, specially when no golden pattern (true result) is available and/or when the signal values may have changed between successive images/volumes to be registered.