Search results for " Infection"

showing 10 items of 3396 documents

Recommendations for enterovirus diagnostics and characterisation within and beyond Europe

2018

Enteroviruses (EV) can cause severe neurological and respiratory infections, and occasionally lead to devastating outbreaks as previously demonstrated with EV-A71 and EV-D68 in Europe. However, these infections are still often underdiagnosed and EV typing data is not currently collected at European level. In order to improve EV diagnostics, collate data on severe EV infections and monitor the circulation of EV types, we have established European non-polio enterovirus network (ENPEN). First task of this cross-border network has been to ensure prompt and adequate diagnosis of these infections in Europe, and hence we present recommendations for non-polio EV detection and typing based on the co…

0301 basic medicineEuropean levelRECOMBINATIONNeurological infectionReviewMOUTH-DISEASEmedicine.disease_causeEMERGENCEFecesCentral Nervous System Infections[SDV.MHEP.MI]Life Sciences [q-bio]/Human health and pathology/Infectious diseasesMedicineRespiratory Tract InfectionsCLINICAL SPECIMENSDiagnosticsDiagnostic Techniques and ProceduresComputingMilieux_MISCELLANEOUSEnterovirusEnterovirus D Human3. Good healthEuropeDetectionPCRInfectious DiseasesINFECTIONS[SDV.MHEP.MI] Life Sciences [q-bio]/Human health and pathology/Infectious diseasesRNA ViralRNA INTERNAL CONTROLVp1 capsid proteinVirus isolation[SDV.MP.PRO] Life Sciences [q-bio]/Microbiology and Parasitology/Protistology[SDV.MP.PRO]Life Sciences [q-bio]/Microbiology and Parasitology/ProtistologyVirus03 medical and health sciencesVirologySURVEILLANCEEnterovirus InfectionsJournal ArticleRESPIRATORY VIRUSESddc:610TypingDisease burdenbusiness.industryOutbreakAMPLIFICATIONVirology[SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/BacteriologyEnterovirus A Human030104 developmental biologyEnterovirusCapsid Proteins[SDV.MP.BAC] Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology610 Medizin und GesundheitEV typingbusinessEuropean non-polio enterovirus network (ENPEN)Journal of Clinical Virology
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Intensive aquaculture selects for increased virulence and interference competition in bacteria

2016

Although increased disease severity driven by intensive farming practices is problematic in food production, the role of evolutionary change in disease is not well understood in these environments. Experiments on parasite evolution are traditionally conducted using laboratory models, often unrelated to economically important systems. We compared how the virulence, growth and competitive ability of a globally important fish pathogen, Flavobacterium columnare , change under intensive aquaculture. We characterized bacterial isolates from disease outbreaks at fish farms during 2003–2010, and compared F. columnare populations in inlet water and outlet water of a fish farm during the 2010 outbre…

0301 basic medicineFish farmingPopulationevoluutioVirulenceDiseaseBiologyFlavobacteriumGeneral Biochemistry Genetics and Molecular BiologyFish DiseasesFlavobacterium columnare03 medical and health sciencesAquacultureFlavobacteriaceae InfectionsevolutionAnimalsSelection Geneticeducationvesiviljely (kalatalous)FinlandResearch ArticlesGeneral Environmental ScienceExperimental evolutioneducation.field_of_studyGeneral Immunology and MicrobiologyEcologyIntensive farmingbusiness.industryta1183virulenssiGeneral MedicineBiological Evolutionvirulence030104 developmental biologyaquaculturePerchesFood processingMicrobial Interactionsta1181General Agricultural and Biological SciencesbusinessSalmonidaefish farmingpathogen
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Microevolutionary response of a gut nematode to intestinal inflammation.

2017

7 pages; International audience; Parasitic helminths interfere with the immune response of their hosts to establish long-lasting, chronic infections. While favorable to the parasite, the capacity to dampen the immune response can also provide a benefit to the host in terms of reduced risk of immune disorders and immunopathology. The immunomodulatory role of nematodes has been exploited in clinical trials to treat a number of inflammatory and immune diseases. However, how parasites adapt to an inflammatory environment remains a poorly explored question. Here, we conducted a serial passage experiment where the gut nematode Heligmosomoides polygyrus was maintained for nine generations in mice …

0301 basic medicineGastrointestinal DiseasesInflammationHost-Parasite InteractionsRodent Diseases03 medical and health sciencesMice0302 clinical medicineImmune systemSerial passageImmunopathology[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/Symbiosismedicine[ SDV.IMM ] Life Sciences [q-bio]/ImmunologyAnimalsAdaptationStrongylida InfectionsInflammationExperimental evolutionNematospiroides dubiusbiologyHost (biology)Life history traitsbiology.organism_classificationColitisBiological Evolution3. Good health030104 developmental biologyInfectious DiseasesNematodeExperimental evolutionImmunologybacteria[SDV.IMM]Life Sciences [q-bio]/ImmunologyParasitologyHeligmosomoides polygyrusmedicine.symptomSerial passage030215 immunology[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Conjugative ESBL plasmids differ in their potential to rescue susceptible bacteria via horizontal gene transfer in lethal antibiotic concentrations.

2017

Conjugative ESBL plasmids differ in their potential to rescue susceptible bacteria via horizontal gene transfer in lethal antibiotic concentrations

0301 basic medicineGene Transfer Horizontalmedicine.drug_classAntiparasitic030106 microbiologyAntibioticsGene transferDrug resistanceBiologybeta-LactamasesMicrobiology03 medical and health sciencesplasmiditPlasmidDrug DiscoveryDrug Resistance Bacterialpolycyclic compoundsmedicineEscherichia coliHumansantimicrobial resistanceEscherichia coli InfectionsPharmacologyta1182biochemical phenomena metabolism and nutritionbacterial infections and mycosesbiology.organism_classificationGlycopeptide3. Good healthAnti-Bacterial Agentsbacterial conjugationHorizontal gene transferhorizontal gene transferhorisontaalinen geeninsiirtoBacteriaPlasmidsThe Journal of antibiotics
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Generation of a novel next-generation sequencing-based method for the isolation of new human papillomavirus types

2018

Abstract With the advent of new molecular tools, the discovery of new papillomaviruses (PVs) has accelerated during the past decade, enabling the expansion of knowledge about the viral populations that inhabit the human body. Human PVs (HPVs) are etiologically linked to benign or malignant lesions of the skin and mucosa. The detection of HPV types can vary widely, depending mainly on the methodology and the quality of the biological sample. Next-generation sequencing is one of the most powerful tools, enabling the discovery of novel viruses in a wide range of biological material. Here, we report a novel protocol for the detection of known and unknown HPV types in human skin and oral gargle …

0301 basic medicineGenotypeComputational biologyBiologyOral cavityPolymerase Chain ReactionArticleDNA sequencinglaw.inventionCohort Studies03 medical and health scienceslawVirologyHumansProspective StudiesPapillomaviridaePapillomaviridaePolymerase chain reactionDNA PrimersSkinHuman papillomavirus typesMouthHpv typesPapillomavirus InfectionsHigh-Throughput Nucleotide SequencingSequence Analysis DNAIsolation (microbiology)biology.organism_classificationBiological materials030104 developmental biologyDNA ViralVirology
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Prevalence of intestinal parasites, with emphasis on the molecular epidemiology of Giardia duodenalis and Blastocystis sp., in the Paranaguá Bay, Bra…

2018

BACKGROUND: Intestinal protozoan parasites are major contributors to the global burden of gastrointestinal disease causing significant socioeconomic consequences. Children living in resource-poor settings with restricted access to water and sanitary services are particularly at risk of these infections. METHODS: A prospective, community-based, cross-sectional survey was conducted in Paraná (southern Brazil) between May 2015 and May 2016. A total of 766 stool samples were individually collected from volunteers (male/female ratio: 0.99; age range: 0-76 years) and used for investigating the presence of intestinal helminth and protozoan species by routine microscopic procedures including the Ka…

0301 basic medicineGiardiasisMaleVeterinary medicineCommunityBlastocystis Infectionsmedicine.disease_causeFeces0302 clinical medicineResidence CharacteristicsSurveys and QuestionnairesPrevalenceProspective StudiesIntestinal Diseases ParasiticChildNematodeeducation.field_of_studyMicroscopySoil-transmitted helminthsMiddle AgedInfectious DiseasesChild PreschoolFemaleAscaris lumbricoidesBrazilHumanAdultGenotypingAdolescent030231 tropical medicinePopulationIntestinal parasiteBiologyDNA Ribosomallcsh:Infectious and parasitic diseases03 medical and health sciencesYoung Adultparasitic diseasesmedicineHelminthHelminthsHumanslcsh:RC109-216ProtozoaeducationAgedIntestinal parasitesBlastocystisMolecular epidemiologyEndolimax nanaResearchInfant NewbornGenetic VariationInfantbiology.organism_classification030104 developmental biologyCross-Sectional StudiesBlastocystisTrichuris trichiuraParasitologyGiardia lamblia
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In vivo fluorescent cercariae reveal the entry portals of Cardiocephaloides longicollis (Rudolphi, 1819) Dubois, 1982 (Strigeidae) into the gilthead …

2019

Background Despite their complex life-cycles involving various types of hosts and free-living stages, digenean trematodes are becoming recurrent model systems. The infection and penetration strategy of the larval stages, i.e. cercariae, into the fish host is poorly understood and information regarding their entry portals is not well-known for most species. Cardiocephaloides longicollis (Rudolphi, 1819) Dubois, 1982 (Digenea, Strigeidae) uses the gilthead seabream (Sparus aurata L.), an important marine fish in Mediterranean aquaculture, as a second intermediate host, where they encyst in the brain as metacercariae. Labelling the cercariae with in vivo fluorescent dyes helped us to track the…

0301 basic medicineGillCardiocephaloides longicollis030231 tropical medicineSuccinimidesZoologyAquacultureTrematode InfectionsCarboxyfluorescein diacetate succinimidyl esterDigeneaHost-Parasite Interactionslcsh:Infectious and parasitic diseasesFish Diseases03 medical and health scienceschemistry.chemical_compound0302 clinical medicineCercarial penetration patternCercarial survival and activityMetacercarial encystmentAnimalsHelminthsMetacercariaelcsh:RC109-216CercariaCardiocephaloides longicollisFluorescent DyesInfectivityLife Cycle StagesbiologyResearchIntermediate hostAquatic animalFluoresceinsbiology.organism_classificationSea Bream030104 developmental biologyInfectious DiseaseschemistryLarvaBenzimidazolesParasitologyTrematodaDigeneaParasites & Vectors
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Role of mucosal immune response and histopathological study in European eel (Anguilla anguilla L.) intraperitoneal challenged by Vibrio anguillarum o…

2021

Abstract The external mucus layer that covers fish skin contains numerous immune substances scarcely studied that act as the first line of defence against a broad spectrum of pathogens. This study aimed to characterize and describe for the first time several humoral immune defence parameters in the skin mucus of the European eel (Anguilla anguilla) after intraperitoneal injection with Vibrio anguillarum or Tenacibaculum soleae. This study evaluated several immune-related enzymes and bactericidal activity against fish pathogenic bacteria in the skin mucus of European eels at 24, 48, and 72 h post-challenge. The results demonstrated that European eel skin mucus showed significant increments i…

0301 basic medicineGillVibrio anguillarummedicine.medical_treatmentIntraperitoneal injectionSettore BIO/05 - ZoologiaAquatic ScienceBiologymedicine.disease_causeMicrobiology03 medical and health scienceschemistry.chemical_compoundFish DiseasesImmune systemAquacultureFlavobacteriaceae InfectionsmedicineEnvironmental ChemistryAnimalsImmunity MucosalSkinVibrioMucosal immunity European eel (Anguilla Anguilla L.) Immunity Mucosal Bacterial challengebusiness.industryPathogenic bacteria04 agricultural and veterinary sciencesGeneral Medicinebiology.organism_classificationAnguillaMucusTenacibaculum030104 developmental biologychemistryVibrio Infections040102 fisheries0401 agriculture forestry and fisheriesLysozymebusinessFishshellfish immunology
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Interleukin-25 Induces Resistance Against Intestinal Trematodes

2016

AbstractEchinostoma caproni is an intestinal trematode that has been extensively used as an experimental model to investigate the factors determining the resistance to intestinal helminths or the development of chronic infections. ICR mice are permissive hosts for E. caproni in which chronic infections are developed, concomitantly with local Th1 responses, elevated levels of local IFN-γ, inflammation and antibody responses. However, mice develop partial resistance to homologous challenge infections after cure of a primary infection, which converts this subject into an adequate model for the study of the mechanisms generating resistance against intestinal helminths. The purpose of the presen…

0301 basic medicineGoblet cellMultidisciplinarySecondary infectionMucinInflammation030108 mycology & parasitologyBiologyPhenotypeArticle03 medical and health sciences030104 developmental biologyImmune systemmedicine.anatomical_structureInterleukin 25ImmunologymedicineHelminthsmedicine.symptomScientific Reports
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Rapid detection of carbapenem resistance: Targeting a zero level of inadequate empiric antibiotic exposure

2016

Resistance to carbapenems is an increasingly encountered phenomenon in the ICU, complicating empiric and targeted antimicrobial therapy. Infections due to carbapenem-resistant microorganisms are characterized by high morbidity and mortality [1, 2]. Recently, there has been an increasing interest in rapid detection techniques, based on real time on-demand easy-to-use PCR, to detect genes responsible for carbapenem resistance. One of these techniques is the Cepheid Xpert Carba-R assay, which is able to detect and differentiate five of the most frequent genes associated with non-susceptibility to carbapenems in Gram-negative bacteria (bla KPC, bla VIM, bla OXA-48, bla IMP-1, bla NDM). The diag…

0301 basic medicineGram-negative bacteriaLetterCarbapenem resistanceMultidrug-resistant bacteria030106 microbiologyDrug ResistanceDrug resistanceCritical Care and Intensive Care MedicineMicrobiologylaw.invention03 medical and health sciences0302 clinical medicinelawGram-Negative Bacteriapolycyclic compoundsMedicineInfection controlHumansCarbapenem resistance; Multidrug-resistant bacteria; Polymerase chain reaction; Critical Care and Intensive Care MedicinePolymerase chain reactionCarbapenem resistancebiologybusiness.industryOutbreak030208 emergency & critical care medicinebiochemical phenomena metabolism and nutritionbacterial infections and mycosesbiology.organism_classificationAntimicrobialPolymerase chain reactionIntensive Care UnitsCarbapenemsEtiologyCarbapenem resistance; Multidrug-resistant bacteria; Polymerase chain reactionbusiness
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